PlantSME Plant secondary metabolism enzyme database

Asparagus officinalis (asparagus_officinalis)

Imported from atlas release summary for Asparagus officinalis.

1110
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 26.04% Phenylpropanoid pathway 23.87% Alkaloid pathway 19.64% Flavonoid pathway 12.52% Rosmarinic acid pathway 10.99% Steroid pathway 6.94%
Family Distribution
BAHD 6.25% 4CL 6.09% C4H 5.94% C3'H/CYP98A 5.49% POD 4.36% UGT 3.72% IFS 3.54% 7DLGT 2.86%
Other Families 61.74%
More Families (97)
T3O 76 2.86% CYP76 75 2.82% UFGT 69 2.6% F3H 67 2.52% DWF4/CYP90B1 61 2.29% STR 56 2.11% NMT 53 1.99% F3'H/CYP75B 48 1.81% H6H 47 1.77% CYP71 47 1.77% BR6OX2/CYP85A2 43 1.62% SMT1/SMT2/SMT3 40 1.5% SGD 36 1.35% LAC 35 1.32% CAS 32 1.2% CODM/T6ODM 30 1.13% CSE 30 1.13% TRI/TRII 29 1.09% CAD 29 1.09% PMT 26 0.98% T16H 25 0.94% IFR 25 0.94% PYKS 24 0.9% HCT 24 0.9% RAS 24 0.9% IO 21 0.79% FNS 20 0.75% TPS 20 0.75% GS 19 0.71% CYP90D1 19 0.71% 16OMT 18 0.68% G8O/G8H 18 0.68% PAL 18 0.68% SLS 17 0.64% CCR 17 0.64% ANR 16 0.6% COMT 16 0.6% CPR 16 0.6% GES 15 0.56% NCS 15 0.56% CPD/CYP90A1 15 0.56% 7DLH 14 0.53% COR 14 0.53% DFR 14 0.53% CYP51G1 14 0.53% BBE 13 0.49% BR6OX1/CYP85A1 13 0.49% FPPS 13 0.49% F5H/CYP84A 12 0.45% F3'5'H/CYP75A 11 0.41% ANS/LDOX 11 0.41% 8HGO 10 0.38% CNMT 9 0.34% CHS 8 0.3% ISY 7 0.26% CCoAOMT 7 0.26% TAT 7 0.26% ROT3/CYP90C1 7 0.26% LAMT 6 0.23% CHI 6 0.23% FLS 6 0.23% SQS/FDFT1 6 0.23% MVD 6 0.23% MPO 5 0.19% CYP719 5 0.19% CYP80B1 5 0.19% SMO1/SMO2 5 0.19% SQE 5 0.19% GGPPS 5 0.19% MVK 5 0.19% TYDC_DDC 4 0.15% TDC 4 0.15% DWF1 4 0.15% DXS 4 0.15% AACT 4 0.15% HMGR 4 0.15% ADC 3 0.11% HPPR 3 0.11% DWF7 3 0.11% MCT/IspD 3 0.11% 6OMT_4OMT_SOMT 2 0.08% FK 2 0.08% HYD1 2 0.08% DET2 2 0.08% CMK/IspE 2 0.08% IDI 2 0.08% PMK 2 0.08% HMGS 2 0.08% CYP80F1 1 0.04% ODC 1 0.04% DWF5 1 0.04% CPI1 1 0.04% DXR 1 0.04% HDS/IspG 1 0.04% HDR/IspH 1 0.04% GPPS 1 0.04% MDS/IspF 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 289 19 BAHD (127) View species results
Phenylpropanoid pathway 265 11 POD (102) View species results
Alkaloid pathway 218 20 NMT (33) View species results
Flavonoid pathway 139 11 UFGT (61) View species results
Rosmarinic acid pathway 122 7 C4H (44) View species results
Steroid pathway 77 11 SMT1/SMT2/SMT3 (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 945 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 214 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
Reset
Gene Pathway Family Confidence Status Best Target
Aoff01G0002850.1 Flavonoid CHS medium pass CHS__00003__sp_B0LDU6_PKS5_RUBID
Aoff03G0015280.1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Aoff04G0003330.1 Flavonoid CHS medium pass CHS__00006__sp_P30074_CHS2_MEDSA
Aoff04G0003340.1 Flavonoid CHS medium pass CHS__00009__sp_Q9AU11_PKS1_RUBID
Aoff04G0007720.1 Flavonoid CHS medium pass CHS__00005__sp_O80400_VPS_HUMLU
Aoff07G0007850.1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Aoff08G0003260.1 Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
Aoff09G0013160.1 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA