Asparagus officinalis (asparagus_officinalis)
Imported from atlas release summary for Asparagus officinalis.
1110
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1110
Candidate Genes
BAHD
6.25%
4CL
6.09%
C4H
5.94%
C3'H/CYP98A
5.49%
POD
4.36%
UGT
3.72%
IFS
3.54%
7DLGT
2.86%
Other Families
61.74%
More Families (97)
T3O
76
2.86%
CYP76
75
2.82%
UFGT
69
2.6%
F3H
67
2.52%
DWF4/CYP90B1
61
2.29%
STR
56
2.11%
NMT
53
1.99%
F3'H/CYP75B
48
1.81%
H6H
47
1.77%
CYP71
47
1.77%
BR6OX2/CYP85A2
43
1.62%
SMT1/SMT2/SMT3
40
1.5%
SGD
36
1.35%
LAC
35
1.32%
CAS
32
1.2%
CODM/T6ODM
30
1.13%
CSE
30
1.13%
TRI/TRII
29
1.09%
CAD
29
1.09%
PMT
26
0.98%
T16H
25
0.94%
IFR
25
0.94%
PYKS
24
0.9%
HCT
24
0.9%
RAS
24
0.9%
IO
21
0.79%
FNS
20
0.75%
TPS
20
0.75%
GS
19
0.71%
CYP90D1
19
0.71%
16OMT
18
0.68%
G8O/G8H
18
0.68%
PAL
18
0.68%
SLS
17
0.64%
CCR
17
0.64%
ANR
16
0.6%
COMT
16
0.6%
CPR
16
0.6%
GES
15
0.56%
NCS
15
0.56%
CPD/CYP90A1
15
0.56%
7DLH
14
0.53%
COR
14
0.53%
DFR
14
0.53%
CYP51G1
14
0.53%
BBE
13
0.49%
BR6OX1/CYP85A1
13
0.49%
FPPS
13
0.49%
F5H/CYP84A
12
0.45%
F3'5'H/CYP75A
11
0.41%
ANS/LDOX
11
0.41%
8HGO
10
0.38%
CNMT
9
0.34%
CHS
8
0.3%
ISY
7
0.26%
CCoAOMT
7
0.26%
TAT
7
0.26%
ROT3/CYP90C1
7
0.26%
LAMT
6
0.23%
CHI
6
0.23%
FLS
6
0.23%
SQS/FDFT1
6
0.23%
MVD
6
0.23%
MPO
5
0.19%
CYP719
5
0.19%
CYP80B1
5
0.19%
SMO1/SMO2
5
0.19%
SQE
5
0.19%
GGPPS
5
0.19%
MVK
5
0.19%
TYDC_DDC
4
0.15%
TDC
4
0.15%
DWF1
4
0.15%
DXS
4
0.15%
AACT
4
0.15%
HMGR
4
0.15%
ADC
3
0.11%
HPPR
3
0.11%
DWF7
3
0.11%
MCT/IspD
3
0.11%
6OMT_4OMT_SOMT
2
0.08%
FK
2
0.08%
HYD1
2
0.08%
DET2
2
0.08%
CMK/IspE
2
0.08%
IDI
2
0.08%
PMK
2
0.08%
HMGS
2
0.08%
CYP80F1
1
0.04%
ODC
1
0.04%
DWF5
1
0.04%
CPI1
1
0.04%
DXR
1
0.04%
HDS/IspG
1
0.04%
HDR/IspH
1
0.04%
GPPS
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 289 | 19 | BAHD (127) | View species results |
| Phenylpropanoid pathway | 265 | 11 | POD (102) | View species results |
| Alkaloid pathway | 218 | 20 | NMT (33) | View species results |
| Flavonoid pathway | 139 | 11 | UFGT (61) | View species results |
| Rosmarinic acid pathway | 122 | 7 | C4H (44) | View species results |
| Steroid pathway | 77 | 11 | SMT1/SMT2/SMT3 (28) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 945 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 214 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| AoffAsparagusV1_Un870008680.1 | Flavonoid | 4CL | medium | pass |
| AoffAsparagusV1_Un870008700.1 | Flavonoid | 4CL | medium | pass |
| AoffAsparagusV1_Un870008710.1 | Flavonoid | 4CL | medium | pass |
| AoffAsparagusV1_Un9000008900.1 | Flavonoid | 4CL | low | borderline |
| Aoff01G0000020.1 | Flavonoid | ANR | medium | borderline |
| Aoff01G0000760.1 | Flavonoid | ANR | medium | borderline |
| Aoff01G0001690.1 | Flavonoid | ANR | high | pass |
| Aoff01G0025690.1 | Flavonoid | ANR | medium | borderline |
| Aoff01G0026250.1 | Flavonoid | ANR | medium | borderline |
| Aoff02G0015820.1 | Flavonoid | ANR | medium | borderline |
| Aoff02G0015830.1 | Flavonoid | ANR | medium | borderline |
| Aoff03G0005510.1 | Flavonoid | ANR | low | borderline |
| Aoff04G0013050.1 | Flavonoid | ANR | low | borderline |
| Aoff05G0006210.1 | Flavonoid | ANR | medium | borderline |
| Aoff05G0027430.1 | Flavonoid | ANR | low | borderline |
| Aoff06G0002310.1 | Flavonoid | ANR | medium | borderline |
| Aoff07G0022690.1 | Flavonoid | ANR | low | borderline |
| Aoff08G0022880.1 | Flavonoid | ANR | medium | borderline |
| AoffAsparagusV1_Un2670002300.1 | Flavonoid | ANR | medium | borderline |
| AoffAsparagusV1_Un3510003510.1 | Flavonoid | ANR | medium | borderline |
| Aoff01G0013170.1 | Flavonoid | ANS/LDOX | medium | borderline |
| Aoff03G0022380.1 | Flavonoid | ANS/LDOX | low | borderline |
| Aoff04G0005960.1 | Flavonoid | ANS/LDOX | medium | borderline |
| Aoff04G0011790.1 | Flavonoid | ANS/LDOX | low | borderline |
| Aoff04G0021410.1 | Flavonoid | ANS/LDOX | low | borderline |
| Aoff04G0026970.1 | Flavonoid | ANS/LDOX | low | borderline |
| Aoff05G0004870.1 | Flavonoid | ANS/LDOX | medium | pass |
| Aoff07G0010990.1 | Flavonoid | ANS/LDOX | medium | borderline |
| Aoff07G0022170.1 | Flavonoid | ANS/LDOX | medium | pass |
| AoffAsparagusV1_Un690007090.1 | Flavonoid | ANS/LDOX | low | borderline |
| AoffAsparagusV1_Un800008080.1 | Flavonoid | ANS/LDOX | low | borderline |
| Aoff01G0021490.1 | Flavonoid | C4H | medium | borderline |
| Aoff01G0021500.1 | Flavonoid | C4H | medium | borderline |
| Aoff05G0020880.1 | Flavonoid | C4H | low | borderline |
| Aoff07G0006260.1 | Flavonoid | C4H | medium | borderline |
| Aoff08G0018200.1 | Flavonoid | C4H | medium | borderline |
| Aoff02G0003520.1 | Flavonoid | CHI | medium | pass |
| Aoff04G0023150.1 | Flavonoid | CHI | low | borderline |
| Aoff07G0003030.1 | Flavonoid | CHI | medium | pass |
| Aoff07G0012340.1 | Flavonoid | CHI | medium | pass |
| Aoff09G0014030.1 | Flavonoid | CHI | medium | pass |
| Aoff10G0002160.1 | Flavonoid | CHI | medium | pass |
| Aoff01G0002850.1 | Flavonoid | CHS | medium | pass |
| Aoff03G0015280.1 | Flavonoid | CHS | medium | pass |
| Aoff04G0003330.1 | Flavonoid | CHS | medium | pass |
| Aoff04G0003340.1 | Flavonoid | CHS | medium | pass |
| Aoff04G0007720.1 | Flavonoid | CHS | medium | pass |
| Aoff07G0007850.1 | Flavonoid | CHS | medium | pass |
| Aoff08G0003260.1 | Flavonoid | CHS | medium | pass |
| Aoff09G0013160.1 | Flavonoid | CHS | medium | pass |