Asparagus officinalis (asparagus_officinalis)
Imported from atlas release summary for Asparagus officinalis.
1393
Candidate Protein Records
1110
Pathway-Level Records
2658
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2658
Family-Level Calls
BAHD
6.25%
4CL
6.09%
C4H
5.94%
C3'H/CYP98A
5.49%
POD
4.36%
UGT
3.72%
IFS
3.54%
7DLGT
2.86%
Other Families
61.74%
More Families (97)
T3O
76
2.86%
CYP76
75
2.82%
UFGT
69
2.6%
F3H
67
2.52%
DWF4/CYP90B1
61
2.29%
STR
56
2.11%
NMT
53
1.99%
F3'H/CYP75B
48
1.81%
H6H
47
1.77%
CYP71
47
1.77%
BR6OX2/CYP85A2
43
1.62%
SMT1/SMT2/SMT3
40
1.5%
SGD
36
1.35%
LAC
35
1.32%
CAS
32
1.2%
CODM/T6ODM
30
1.13%
CSE
30
1.13%
TRI/TRII
29
1.09%
CAD
29
1.09%
PMT
26
0.98%
T16H
25
0.94%
IFR
25
0.94%
PYKS
24
0.9%
HCT
24
0.9%
RAS
24
0.9%
IO
21
0.79%
FNS
20
0.75%
TPS
20
0.75%
GS
19
0.71%
CYP90D1
19
0.71%
16OMT
18
0.68%
G8O/G8H
18
0.68%
PAL
18
0.68%
SLS
17
0.64%
CCR
17
0.64%
ANR
16
0.6%
COMT
16
0.6%
CPR
16
0.6%
GES
15
0.56%
NCS
15
0.56%
CPD/CYP90A1
15
0.56%
7DLH
14
0.53%
COR
14
0.53%
DFR
14
0.53%
CYP51G1
14
0.53%
BBE
13
0.49%
BR6OX1/CYP85A1
13
0.49%
FPPS
13
0.49%
F5H/CYP84A
12
0.45%
F3'5'H/CYP75A
11
0.41%
ANS/LDOX
11
0.41%
8HGO
10
0.38%
CNMT
9
0.34%
CHS
8
0.3%
ISY
7
0.26%
CCoAOMT
7
0.26%
TAT
7
0.26%
ROT3/CYP90C1
7
0.26%
LAMT
6
0.23%
CHI
6
0.23%
FLS
6
0.23%
SQS/FDFT1
6
0.23%
MVD
6
0.23%
MPO
5
0.19%
CYP719
5
0.19%
CYP80B1
5
0.19%
SMO1/SMO2
5
0.19%
SQE
5
0.19%
GGPPS
5
0.19%
MVK
5
0.19%
TYDC_DDC
4
0.15%
TDC
4
0.15%
DWF1
4
0.15%
DXS
4
0.15%
AACT
4
0.15%
HMGR
4
0.15%
ADC
3
0.11%
HPPR
3
0.11%
DWF7
3
0.11%
MCT/IspD
3
0.11%
6OMT_4OMT_SOMT
2
0.08%
FK
2
0.08%
HYD1
2
0.08%
DET2
2
0.08%
CMK/IspE
2
0.08%
IDI
2
0.08%
PMK
2
0.08%
HMGS
2
0.08%
CYP80F1
1
0.04%
ODC
1
0.04%
DWF5
1
0.04%
CPI1
1
0.04%
DXR
1
0.04%
HDS/IspG
1
0.04%
HDR/IspH
1
0.04%
GPPS
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 289 | 19 | BAHD (127) | View species results |
| Phenylpropanoid pathway | 265 | 11 | POD (102) | View species results |
| Alkaloid pathway | 218 | 20 | NMT (33) | View species results |
| Flavonoid pathway | 139 | 11 | UFGT (61) | View species results |
| Rosmarinic acid pathway | 122 | 7 | C4H (44) | View species results |
| Steroid pathway | 77 | 11 | SMT1/SMT2/SMT3 (28) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 945 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 214 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Aoff07G0011950.1 | Rosmarinic Acid | 4CL | medium | pass |
| Aoff07G0011960.1 | Rosmarinic Acid | 4CL | medium | pass |
| Aoff07G0021790.1 | Rosmarinic Acid | 4CL | medium | pass |
| Aoff09G0005630.1 | Rosmarinic Acid | 4CL | medium | pass |
| Aoff09G0005640.1 | Rosmarinic Acid | 4CL | medium | pass |
| Aoff09G0005650.1 | Rosmarinic Acid | 4CL | medium | pass |
| Aoff09G0008130.1 | Rosmarinic Acid | 4CL | low | borderline |
| Aoff09G0009220.1 | Rosmarinic Acid | 4CL | medium | pass |
| Aoff09G0012990.1 | Rosmarinic Acid | 4CL | low | borderline |
| Aoff10G0007410.1 | Rosmarinic Acid | 4CL | medium | pass |
| Aoff10G0008010.1 | Rosmarinic Acid | 4CL | medium | pass |
| Aoff10G0008430.1 | Rosmarinic Acid | 4CL | medium | pass |
| Aoff10G0008440.1 | Rosmarinic Acid | 4CL | medium | pass |
| AoffAsparagusV1_Un2800002530.1 | Rosmarinic Acid | 4CL | medium | pass |
| AoffAsparagusV1_Un2800002550.1 | Rosmarinic Acid | 4CL | medium | pass |
| AoffAsparagusV1_Un7940007980.1 | Rosmarinic Acid | 4CL | medium | pass |
| AoffAsparagusV1_Un870008680.1 | Rosmarinic Acid | 4CL | medium | pass |
| AoffAsparagusV1_Un870008700.1 | Rosmarinic Acid | 4CL | medium | pass |
| AoffAsparagusV1_Un870008710.1 | Rosmarinic Acid | 4CL | medium | pass |
| AoffAsparagusV1_Un9000008900.1 | Rosmarinic Acid | 4CL | low | borderline |
| Aoff01G0006760.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff01G0010340.1 | Rosmarinic Acid | C4H | medium | pass |
| Aoff01G0011240.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff01G0011360.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff01G0011370.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff01G0011550.1 | Rosmarinic Acid | C4H | medium | pass |
| Aoff01G0012940.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff01G0020850.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff01G0020870.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff01G0021490.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff01G0021500.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff01G0022590.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff01G0024290.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff01G0027380.1 | Rosmarinic Acid | C4H | medium | pass |
| Aoff01G0027730.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff01G0027880.1 | Rosmarinic Acid | C4H | medium | pass |
| Aoff01G0027890.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff01G0028040.1 | Rosmarinic Acid | C4H | medium | pass |
| Aoff01G0030900.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff01G0031390.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff02G0003310.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff02G0004200.1 | Rosmarinic Acid | C4H | medium | pass |
| Aoff02G0004210.1 | Rosmarinic Acid | C4H | medium | pass |
| Aoff02G0008140.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff03G0002430.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff03G0006690.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff03G0008100.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff03G0012050.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff03G0013430.1 | Rosmarinic Acid | C4H | low | borderline |
| Aoff03G0016010.1 | Rosmarinic Acid | C4H | low | borderline |