Asparagus setaceus (asparagus_setaceus)
Imported from atlas release summary for Asparagus setaceus.
1424
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1424
Candidate Genes
C4H
6.73%
C3'H/CYP98A
6.14%
BAHD
5.35%
4CL
4.73%
UGT
4.39%
CYP76
4.0%
IFS
3.66%
7DLGT
3.41%
Other Families
61.61%
More Families (96)
POD
120
3.38%
UFGT
116
3.26%
T3O
112
3.15%
F3H
105
2.96%
BR6OX2/CYP85A2
76
2.14%
NMT
73
2.05%
H6H
73
2.05%
STR
66
1.86%
F3'H/CYP75B
66
1.86%
DWF4/CYP90B1
66
1.86%
G8O/G8H
53
1.49%
CAD
46
1.29%
CODM/T6ODM
44
1.24%
T16H
43
1.21%
CYP71
43
1.21%
SGD
40
1.13%
TRI/TRII
40
1.13%
SMT1/SMT2/SMT3
40
1.13%
CAS
37
1.04%
FNS
36
1.01%
LAC
36
1.01%
RAS
36
1.01%
COMT
33
0.93%
HCT
32
0.9%
PYKS
29
0.82%
IFR
29
0.82%
CYP90D1
29
0.82%
PMT
27
0.76%
F3'5'H/CYP75A
27
0.76%
CSE
27
0.76%
TPS
25
0.7%
GES
24
0.68%
PAL
24
0.68%
IO
23
0.65%
NCS
23
0.65%
ANR
22
0.62%
GS
20
0.56%
SLS
20
0.56%
CCR
20
0.56%
7DLH
18
0.51%
16OMT
18
0.51%
CPD/CYP90A1
18
0.51%
COR
17
0.48%
F5H/CYP84A
15
0.42%
CHS
14
0.39%
ROT3/CYP90C1
14
0.39%
BR6OX1/CYP85A1
13
0.37%
FPPS
13
0.37%
BBE
11
0.31%
DFR
11
0.31%
ANS/LDOX
11
0.31%
SQS/FDFT1
11
0.31%
8HGO
10
0.28%
CNMT
10
0.28%
CPR
10
0.28%
CCoAOMT
9
0.25%
MPO
8
0.23%
LAMT
8
0.23%
CYP80B1
7
0.2%
TDC
7
0.2%
ISY
7
0.2%
FLS
7
0.2%
TAT
7
0.2%
DET2
7
0.2%
AACT
7
0.2%
MVK
7
0.2%
TYDC_DDC
6
0.17%
CYP719
6
0.17%
MVD
6
0.17%
HPPR
5
0.14%
SMO1/SMO2
5
0.14%
DWF1
5
0.14%
GGPPS
5
0.14%
ODC
4
0.11%
CHI
4
0.11%
SQE
4
0.11%
CYP51G1
4
0.11%
MCT/IspD
4
0.11%
DXS
4
0.11%
ADC
3
0.08%
DWF7
3
0.08%
PMK
3
0.08%
IDI
3
0.08%
XMT_MXMT_DXMT
2
0.06%
6OMT_4OMT_SOMT
2
0.06%
FK
2
0.06%
HYD1
2
0.06%
DXR
2
0.06%
HMGR
2
0.06%
CYP80F1
1
0.03%
DWF5
1
0.03%
CPI1
1
0.03%
HMGS
1
0.03%
HDS/IspG
1
0.03%
MDS/IspF
1
0.03%
CMK/IspE
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 392 | 18 | UGT (138) | View species results |
| Alkaloid pathway | 357 | 21 | 7DLGT (65) | View species results |
| Phenylpropanoid pathway | 285 | 12 | POD (102) | View species results |
| Flavonoid pathway | 191 | 14 | UFGT (105) | View species results |
| Rosmarinic acid pathway | 115 | 7 | 4CL (40) | View species results |
| Steroid pathway | 84 | 12 | CAS (33) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1383 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 258 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Aset01G0001050.1 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Aset01G0002090.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Aset01G0007520.1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Aset01G0009600.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Aset01G0012360.1 | Alkaloid | NMT | medium | borderline | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| Aset01G0012370.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Aset01G0012380.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Aset01G0015220.1 | Alkaloid | NMT | low | borderline | NMT__00033__sp_Q5QD03_SUVH3_CHLRE |
| Aset01G0016940.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Aset01G0016970.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Aset01G0020590.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| Aset01G0034330.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| Aset02G0016810.1 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Aset02G0019830.1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Aset02G0022330.1 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Aset02G0022700.1 | Alkaloid | NMT | low | borderline | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Aset02G0022720.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Aset02G0022970.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Aset03G0003200.1 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| Aset03G0003850.1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Aset03G0007000.1 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Aset03G0016520.1 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Aset03G0016960.1 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| Aset03G0018840.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Aset03G0021790.1 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Aset03G0023160.1 | Alkaloid | NMT | low | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Aset03G0023960.1 | Alkaloid | NMT | medium | borderline | NMT__00015__sp_C8YTM5_PEAM2_WHEAT |
| Aset03G0027970.1 | Alkaloid | NMT | medium | borderline | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| Aset03G0033580.1 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| Aset04G0004100.1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Aset04G0005550.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Aset04G0011250.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Aset04G0022520.1 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Aset04G0026450.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Aset04G0027730.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Aset04G0027750.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Aset04G0027760.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Aset04G0028090.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Aset04G0030380.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Aset04G0030390.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Aset04G0030400.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Aset04G0030410.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Aset04G0030420.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Aset04G0030430.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Aset04G0030440.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Aset04G0030480.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Aset05G0010300.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Aset05G0010870.1 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Aset05G0022250.1 | Alkaloid | NMT | medium | pass | NMT__00027__sp_Q10MI4_EZ1_ORYSJ |
| Aset05G0022470.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |