Asparagus setaceus (asparagus_setaceus)
Imported from atlas release summary for Asparagus setaceus.
1424
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1424
Candidate Genes
C4H
6.73%
C3'H/CYP98A
6.14%
BAHD
5.35%
4CL
4.73%
UGT
4.39%
CYP76
4.0%
IFS
3.66%
7DLGT
3.41%
Other Families
61.61%
More Families (96)
POD
120
3.38%
UFGT
116
3.26%
T3O
112
3.15%
F3H
105
2.96%
BR6OX2/CYP85A2
76
2.14%
NMT
73
2.05%
H6H
73
2.05%
STR
66
1.86%
F3'H/CYP75B
66
1.86%
DWF4/CYP90B1
66
1.86%
G8O/G8H
53
1.49%
CAD
46
1.29%
CODM/T6ODM
44
1.24%
T16H
43
1.21%
CYP71
43
1.21%
SGD
40
1.13%
TRI/TRII
40
1.13%
SMT1/SMT2/SMT3
40
1.13%
CAS
37
1.04%
FNS
36
1.01%
LAC
36
1.01%
RAS
36
1.01%
COMT
33
0.93%
HCT
32
0.9%
PYKS
29
0.82%
IFR
29
0.82%
CYP90D1
29
0.82%
PMT
27
0.76%
F3'5'H/CYP75A
27
0.76%
CSE
27
0.76%
TPS
25
0.7%
GES
24
0.68%
PAL
24
0.68%
IO
23
0.65%
NCS
23
0.65%
ANR
22
0.62%
GS
20
0.56%
SLS
20
0.56%
CCR
20
0.56%
7DLH
18
0.51%
16OMT
18
0.51%
CPD/CYP90A1
18
0.51%
COR
17
0.48%
F5H/CYP84A
15
0.42%
CHS
14
0.39%
ROT3/CYP90C1
14
0.39%
BR6OX1/CYP85A1
13
0.37%
FPPS
13
0.37%
BBE
11
0.31%
DFR
11
0.31%
ANS/LDOX
11
0.31%
SQS/FDFT1
11
0.31%
8HGO
10
0.28%
CNMT
10
0.28%
CPR
10
0.28%
CCoAOMT
9
0.25%
MPO
8
0.23%
LAMT
8
0.23%
CYP80B1
7
0.2%
TDC
7
0.2%
ISY
7
0.2%
FLS
7
0.2%
TAT
7
0.2%
DET2
7
0.2%
AACT
7
0.2%
MVK
7
0.2%
TYDC_DDC
6
0.17%
CYP719
6
0.17%
MVD
6
0.17%
HPPR
5
0.14%
SMO1/SMO2
5
0.14%
DWF1
5
0.14%
GGPPS
5
0.14%
ODC
4
0.11%
CHI
4
0.11%
SQE
4
0.11%
CYP51G1
4
0.11%
MCT/IspD
4
0.11%
DXS
4
0.11%
ADC
3
0.08%
DWF7
3
0.08%
PMK
3
0.08%
IDI
3
0.08%
XMT_MXMT_DXMT
2
0.06%
6OMT_4OMT_SOMT
2
0.06%
FK
2
0.06%
HYD1
2
0.06%
DXR
2
0.06%
HMGR
2
0.06%
CYP80F1
1
0.03%
DWF5
1
0.03%
CPI1
1
0.03%
HMGS
1
0.03%
HDS/IspG
1
0.03%
MDS/IspF
1
0.03%
CMK/IspE
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 392 | 18 | UGT (138) | View species results |
| Alkaloid pathway | 357 | 21 | 7DLGT (65) | View species results |
| Phenylpropanoid pathway | 285 | 12 | POD (102) | View species results |
| Flavonoid pathway | 191 | 14 | UFGT (105) | View species results |
| Rosmarinic acid pathway | 115 | 7 | 4CL (40) | View species results |
| Steroid pathway | 84 | 12 | CAS (33) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1383 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 258 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Aset07G0005930.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aset07G0006390.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aset07G0009050.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aset07G0010910.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aset07G0014290.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aset08G0003290.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aset08G0009040.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Aset08G0009050.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Aset08G0009830.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aset08G0015370.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Aset09G0003070.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aset09G0005960.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aset09G0010920.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aset09G0011060.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aset10G0007620.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Aset10G0013020.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |