Bathycoccus prasinos (bathycoccus_prasinos)
Imported from atlas release summary for Bathycoccus prasinos.
74
Candidate Genes
70
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
74
Candidate Genes
NMT
8.43%
4CL
8.05%
BAHD
6.9%
IFR
4.98%
CYP71
4.98%
POD
3.83%
C4H
3.45%
CNMT
3.07%
Other Families
56.32%
More Families (62)
STR
8
3.07%
C3'H/CYP98A
7
2.68%
GS
6
2.3%
CPR
6
2.3%
F3H
5
1.92%
CAD
5
1.92%
SMT1/SMT2/SMT3
5
1.92%
CYP76
5
1.92%
COR
4
1.53%
TRI/TRII
4
1.53%
H6H
4
1.53%
IFS
4
1.53%
CCR
4
1.53%
DWF4/CYP90B1
4
1.53%
T3O
3
1.15%
FNS
3
1.15%
F3'5'H/CYP75A
3
1.15%
CSE
3
1.15%
CAS
3
1.15%
CPD/CYP90A1
3
1.15%
AACT
3
1.15%
GGPPS
3
1.15%
FPPS
3
1.15%
8HGO
2
0.77%
CODM/T6ODM
2
0.77%
SLS
2
0.77%
PMT
2
0.77%
G8O/G8H
2
0.77%
DFR
2
0.77%
F5H/CYP84A
2
0.77%
SQS/FDFT1
2
0.77%
BR6OX2/CYP85A2
2
0.77%
IDI
2
0.77%
PYKS
1
0.38%
7DLH
1
0.38%
TDC
1
0.38%
CYP80F1
1
0.38%
MPO
1
0.38%
CYP80B1
1
0.38%
ODC
1
0.38%
CYP719
1
0.38%
UFGT
1
0.38%
CCoAOMT
1
0.38%
TAT
1
0.38%
RAS
1
0.38%
SQE
1
0.38%
BR6OX1/CYP85A1
1
0.38%
CPI1
1
0.38%
FK
1
0.38%
CYP51G1
1
0.38%
DWF5
1
0.38%
HMGS
1
0.38%
HDR/IspH
1
0.38%
MCT/IspD
1
0.38%
DXR
1
0.38%
HMGR
1
0.38%
MVK
1
0.38%
HDS/IspG
1
0.38%
DXS
1
0.38%
CMK/IspE
1
0.38%
UGT
1
0.38%
MDS/IspF
1
0.38%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 28 | 12 | BAHD (10) | View species results |
| Alkaloid pathway | 18 | 9 | COR (4) | View species results |
| Phenylpropanoid pathway | 12 | 4 | POD (8) | View species results |
| Steroid pathway | 10 | 7 | CAS (3) | View species results |
| Rosmarinic acid pathway | 4 | 2 | CPR (3) | View species results |
| Flavonoid pathway | 2 | 1 | IFR (2) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 19 | 65 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, DWF4/CYP90B1, F3'5'H/CYP75A, F5H/CYP84A, G8O/G8H, IFS, SLS, T3O |
| BAHD/acyltransferase | 2 | 19 | BAHD, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Bathy02g06010 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Bathy04g01390 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Bathy04g04850 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| Bathy05g00180 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Bathy05g05160 | Alkaloid | NMT | low | borderline | NMT__00020__sp_O23372_ATXR3_ARATH |
| Bathy06g02640 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Bathy06g02690 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Bathy06g03300 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Bathy07g00030 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Bathy07g04690 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Bathy08g00510 | Alkaloid | NMT | medium | borderline | NMT__00014__sp_C3SBW0_PNMT_THLFG |
| Bathy09g03100 | Alkaloid | NMT | low | borderline | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Bathy09g04120 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| Bathy10g01050 | Alkaloid | NMT | low | borderline | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Bathy11g01420 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Bathy12g00510 | Alkaloid | NMT | low | borderline | NMT__00027__sp_Q10MI4_EZ1_ORYSJ |
| Bathy12g03590 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Bathy12g03770 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Bathy13g02050 | Alkaloid | NMT | low | borderline | NMT__00020__sp_O23372_ATXR3_ARATH |
| Bathy14g00980 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Bathy17g00430 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Bathy17g02220 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |