PlantSME Plant secondary metabolism enzyme database

Bathycoccus prasinos (bathycoccus_prasinos)

Imported from atlas release summary for Bathycoccus prasinos.

74
Candidate Genes
70
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 37.84% Alkaloid pathway 24.32% Phenylpropanoid pathway 16.22% Steroid pathway 13.51% Rosmarinic acid pathway 5.41% Flavonoid pathway 2.7%
Family Distribution
NMT 8.43% 4CL 8.05% BAHD 6.9% IFR 4.98% CYP71 4.98% POD 3.83% C4H 3.45% CNMT 3.07%
Other Families 56.32%
More Families (62)
STR 8 3.07% C3'H/CYP98A 7 2.68% GS 6 2.3% CPR 6 2.3% F3H 5 1.92% CAD 5 1.92% SMT1/SMT2/SMT3 5 1.92% CYP76 5 1.92% COR 4 1.53% TRI/TRII 4 1.53% H6H 4 1.53% IFS 4 1.53% CCR 4 1.53% DWF4/CYP90B1 4 1.53% T3O 3 1.15% FNS 3 1.15% F3'5'H/CYP75A 3 1.15% CSE 3 1.15% CAS 3 1.15% CPD/CYP90A1 3 1.15% AACT 3 1.15% GGPPS 3 1.15% FPPS 3 1.15% 8HGO 2 0.77% CODM/T6ODM 2 0.77% SLS 2 0.77% PMT 2 0.77% G8O/G8H 2 0.77% DFR 2 0.77% F5H/CYP84A 2 0.77% SQS/FDFT1 2 0.77% BR6OX2/CYP85A2 2 0.77% IDI 2 0.77% PYKS 1 0.38% 7DLH 1 0.38% TDC 1 0.38% CYP80F1 1 0.38% MPO 1 0.38% CYP80B1 1 0.38% ODC 1 0.38% CYP719 1 0.38% UFGT 1 0.38% CCoAOMT 1 0.38% TAT 1 0.38% RAS 1 0.38% SQE 1 0.38% BR6OX1/CYP85A1 1 0.38% CPI1 1 0.38% FK 1 0.38% CYP51G1 1 0.38% DWF5 1 0.38% HMGS 1 0.38% HDR/IspH 1 0.38% MCT/IspD 1 0.38% DXR 1 0.38% HMGR 1 0.38% MVK 1 0.38% HDS/IspG 1 0.38% DXS 1 0.38% CMK/IspE 1 0.38% UGT 1 0.38% MDS/IspF 1 0.38%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 28 12 BAHD (10) View species results
Alkaloid pathway 18 9 COR (4) View species results
Phenylpropanoid pathway 12 4 POD (8) View species results
Steroid pathway 10 7 CAS (3) View species results
Rosmarinic acid pathway 4 2 CPR (3) View species results
Flavonoid pathway 2 1 IFR (2) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 19 65 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, DWF4/CYP90B1, F3'5'H/CYP75A, F5H/CYP84A, G8O/G8H, IFS, SLS, T3O
BAHD/acyltransferase 2 19 BAHD, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Gene Pathway Family Confidence Status Best Target
Bathy02g00310 Phenylpropanoid POD medium pass POD__00012__sp_Q10N21_APX1_ORYSJ
Bathy03g04700 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Bathy04g00180 Phenylpropanoid POD medium pass POD__00012__sp_Q10N21_APX1_ORYSJ
Bathy04g01040 Phenylpropanoid POD medium pass POD__00008__sp_P52574_REHY_SYNRU
Bathy05g04600 Phenylpropanoid POD low borderline POD__00019__sp_Q949Y3_PPA26_ARATH
Bathy06g02490 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
Bathy09g00850 Phenylpropanoid POD medium pass POD__00012__sp_Q10N21_APX1_ORYSJ
Bathy10g03880 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
Bathy14g02780 Phenylpropanoid POD low borderline POD__00005__sp_O22448_GPX5_CHLRE
Bathy16g00270 Phenylpropanoid POD medium pass POD__00026__sp_Q9XEX2_PRX2B_ARATH