Beta vulgaris (beta_vulgaris)
Imported from atlas release summary for Beta vulgaris.
1080
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1080
Candidate Genes
C4H
6.64%
C3'H/CYP98A
6.36%
BAHD
5.8%
POD
4.54%
CYP76
3.98%
4CL
3.91%
UFGT
3.74%
UGT
3.7%
Other Families
61.31%
More Families (96)
7DLGT
102
3.57%
T3O
100
3.5%
IFS
96
3.36%
F3H
84
2.94%
NMT
71
2.48%
F3'H/CYP75B
69
2.41%
DWF4/CYP90B1
67
2.34%
BR6OX2/CYP85A2
49
1.71%
CODM/T6ODM
45
1.57%
H6H
44
1.54%
STR
44
1.54%
CYP71
41
1.43%
SMT1/SMT2/SMT3
37
1.29%
TRI/TRII
35
1.22%
PYKS
33
1.15%
COMT
32
1.12%
HCT
31
1.08%
CYP90D1
28
0.98%
RAS
27
0.94%
SLS
26
0.91%
TPS
26
0.91%
CAD
25
0.87%
G8O/G8H
24
0.84%
16OMT
24
0.84%
LAC
24
0.84%
CYP51G1
24
0.84%
GES
22
0.77%
IFR
22
0.77%
PMT
21
0.73%
SGD
21
0.73%
FNS
20
0.7%
CSE
20
0.7%
F3'5'H/CYP75A
19
0.66%
BR6OX1/CYP85A1
19
0.66%
IO
18
0.63%
T16H
17
0.59%
7DLH
17
0.59%
BBE
16
0.56%
CAS
16
0.56%
LAMT
14
0.49%
GS
14
0.49%
NCS
14
0.49%
CHS
14
0.49%
CCR
12
0.42%
TAT
12
0.42%
F5H/CYP84A
11
0.38%
8HGO
10
0.35%
FPPS
10
0.35%
MPO
9
0.31%
TYDC_DDC
9
0.31%
ANR
9
0.31%
ANS/LDOX
9
0.31%
DFR
9
0.31%
CPD/CYP90A1
9
0.31%
COR
8
0.28%
SQS/FDFT1
8
0.28%
HYD1
8
0.28%
CNMT
6
0.21%
CYP719
6
0.21%
CHI
6
0.21%
CCoAOMT
6
0.21%
CPR
6
0.21%
AACT
6
0.21%
CYP80B1
5
0.17%
ISY
5
0.17%
ROT3/CYP90C1
5
0.17%
GGPPS
4
0.14%
MVK
4
0.14%
XMT_MXMT_DXMT
3
0.1%
PAL
3
0.1%
HPPR
3
0.1%
SQE
3
0.1%
DWF7
3
0.1%
DXS
3
0.1%
MCT/IspD
3
0.1%
TDC
2
0.07%
ADC
2
0.07%
6OMT_4OMT_SOMT
2
0.07%
FLS
2
0.07%
DET2
2
0.07%
SMO1/SMO2
2
0.07%
PMK
2
0.07%
MVD
2
0.07%
ODC
1
0.03%
CYP80F1
1
0.03%
CPI1
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
DWF1
1
0.03%
IDI
1
0.03%
HMGS
1
0.03%
MDS/IspF
1
0.03%
CMK/IspE
1
0.03%
HMGR
1
0.03%
HDR/IspH
1
0.03%
HDS/IspG
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 302 | 18 | BAHD (115) | View species results |
| Phenylpropanoid pathway | 242 | 11 | POD (117) | View species results |
| Alkaloid pathway | 232 | 21 | 7DLGT (47) | View species results |
| Flavonoid pathway | 155 | 10 | UFGT (102) | View species results |
| Rosmarinic acid pathway | 93 | 7 | C4H (43) | View species results |
| Steroid pathway | 56 | 13 | SMT1/SMT2/SMT3 (20) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1137 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 224 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| BEvul01G0000890.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul01G0014890.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul02G0001550.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul02G0001660.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul02G0010980.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul02G0012170.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul03G0004680.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul03G0010720.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| BEvul03G0021830.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul03G0022810.1 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| BEvul04G0000420.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul04G0006130.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul04G0008130.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul04G0020500.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul04G0026520.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul05G0014130.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul05G0019120.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| BEvul05G0021790.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul05G0023030.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul06G0002890.1 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| BEvul06G0011660.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul06G0013390.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul06G0014480.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul06G0020570.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul06G0022060.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul07G0002520.1 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| BEvul07G0004000.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul07G0005090.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| BEvul07G0007970.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul07G0012010.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul07G0012020.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul07G0012030.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul07G0015160.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul07G0024280.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul08G0003100.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul08G0003180.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul08G0007940.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| BEvul08G0012160.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul08G0022030.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul09G0005710.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul09G0008660.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul09G0008700.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul09G0008740.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| BEvul09G0013280.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |