Beta vulgaris (beta_vulgaris)
Imported from atlas release summary for Beta vulgaris.
1080
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1080
Candidate Genes
C4H
6.64%
C3'H/CYP98A
6.36%
BAHD
5.8%
POD
4.54%
CYP76
3.98%
4CL
3.91%
UFGT
3.74%
UGT
3.7%
Other Families
61.31%
More Families (96)
7DLGT
102
3.57%
T3O
100
3.5%
IFS
96
3.36%
F3H
84
2.94%
NMT
71
2.48%
F3'H/CYP75B
69
2.41%
DWF4/CYP90B1
67
2.34%
BR6OX2/CYP85A2
49
1.71%
CODM/T6ODM
45
1.57%
H6H
44
1.54%
STR
44
1.54%
CYP71
41
1.43%
SMT1/SMT2/SMT3
37
1.29%
TRI/TRII
35
1.22%
PYKS
33
1.15%
COMT
32
1.12%
HCT
31
1.08%
CYP90D1
28
0.98%
RAS
27
0.94%
SLS
26
0.91%
TPS
26
0.91%
CAD
25
0.87%
G8O/G8H
24
0.84%
16OMT
24
0.84%
LAC
24
0.84%
CYP51G1
24
0.84%
GES
22
0.77%
IFR
22
0.77%
PMT
21
0.73%
SGD
21
0.73%
FNS
20
0.7%
CSE
20
0.7%
F3'5'H/CYP75A
19
0.66%
BR6OX1/CYP85A1
19
0.66%
IO
18
0.63%
T16H
17
0.59%
7DLH
17
0.59%
BBE
16
0.56%
CAS
16
0.56%
LAMT
14
0.49%
GS
14
0.49%
NCS
14
0.49%
CHS
14
0.49%
CCR
12
0.42%
TAT
12
0.42%
F5H/CYP84A
11
0.38%
8HGO
10
0.35%
FPPS
10
0.35%
MPO
9
0.31%
TYDC_DDC
9
0.31%
ANR
9
0.31%
ANS/LDOX
9
0.31%
DFR
9
0.31%
CPD/CYP90A1
9
0.31%
COR
8
0.28%
SQS/FDFT1
8
0.28%
HYD1
8
0.28%
CNMT
6
0.21%
CYP719
6
0.21%
CHI
6
0.21%
CCoAOMT
6
0.21%
CPR
6
0.21%
AACT
6
0.21%
CYP80B1
5
0.17%
ISY
5
0.17%
ROT3/CYP90C1
5
0.17%
GGPPS
4
0.14%
MVK
4
0.14%
XMT_MXMT_DXMT
3
0.1%
PAL
3
0.1%
HPPR
3
0.1%
SQE
3
0.1%
DWF7
3
0.1%
DXS
3
0.1%
MCT/IspD
3
0.1%
TDC
2
0.07%
ADC
2
0.07%
6OMT_4OMT_SOMT
2
0.07%
FLS
2
0.07%
DET2
2
0.07%
SMO1/SMO2
2
0.07%
PMK
2
0.07%
MVD
2
0.07%
ODC
1
0.03%
CYP80F1
1
0.03%
CPI1
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
DWF1
1
0.03%
IDI
1
0.03%
HMGS
1
0.03%
MDS/IspF
1
0.03%
CMK/IspE
1
0.03%
HMGR
1
0.03%
HDR/IspH
1
0.03%
HDS/IspG
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 302 | 18 | BAHD (115) | View species results |
| Phenylpropanoid pathway | 242 | 11 | POD (117) | View species results |
| Alkaloid pathway | 232 | 21 | 7DLGT (47) | View species results |
| Flavonoid pathway | 155 | 10 | UFGT (102) | View species results |
| Rosmarinic acid pathway | 93 | 7 | C4H (43) | View species results |
| Steroid pathway | 56 | 13 | SMT1/SMT2/SMT3 (20) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1137 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 224 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| BEvul05G0022880.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| BEvul06G0003740.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul06G0014840.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul06G0022040.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul06G0022460.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul07G0004280.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul07G0011040.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul07G0011480.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul08G0005150.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul08G0005190.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul08G0005200.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul08G0005210.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul08G0009870.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| BEvul08G0014280.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul08G0014480.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul08G0015560.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul08G0015590.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul08G0015610.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul08G0015620.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul08G0016460.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul09G0011650.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| BEvul09G0013300.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvul09G0015460.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| BEvulScaffold_00050005730.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| BEvul03G0009330.1 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| BEvul03G0011730.1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| BEvul05G0014510.1 | Alkaloid | COR | medium | pass | COR__00001__sp_B9VRJ2_COR15_PAPSO |
| BEvul05G0014520.1 | Alkaloid | COR | medium | pass | COR__00003__sp_Q9SQ68_COR13_PAPSO |
| BEvul06G0006550.1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| BEvul06G0006570.1 | Alkaloid | COR | medium | pass | COR__00002__sp_Q9SQ67_COR14_PAPSO |
| BEvul07G0010370.1 | Alkaloid | COR | medium | pass | COR__00005__sp_Q9SQ70_COR11_PAPSO |
| BEvul09G0009830.1 | Alkaloid | COR | medium | pass | COR__00004__sp_Q9SQ69_COR12_PAPSO |
| BEvul02G0012250.1 | Alkaloid | CYP719 | medium | borderline | CYP719__00011__sp_Q948Y1_C719A_COPJA |
| BEvul06G0000260.1 | Alkaloid | CYP719 | medium | borderline | CYP719__00009__sp_Q50LH3_C7192_ESCCA |
| BEvul06G0022940.1 | Alkaloid | CYP719 | medium | borderline | CYP719__00007__sp_L7T720_C719A_PODPE |
| BEvul06G0022950.1 | Alkaloid | CYP719 | medium | borderline | CYP719__00007__sp_L7T720_C719A_PODPE |
| BEvul06G0022960.1 | Alkaloid | CYP719 | medium | borderline | CYP719__00007__sp_L7T720_C719A_PODPE |
| BEvul08G0017680.1 | Alkaloid | CYP719 | medium | borderline | CYP719__00005__sp_B5UAQ8_C7195_ESCCA |
| BEvul01G0002620.1 | Alkaloid | CYP80B1 | medium | borderline | CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA |
| BEvul03G0016750.1 | Alkaloid | CYP80B1 | medium | borderline | CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA |
| BEvul03G0018420.1 | Alkaloid | CYP80B1 | medium | borderline | CYP80B1__00001__sp_I3V6B1_C80BX_PAPSO |
| BEvul03G0024460.1 | Alkaloid | CYP80B1 | medium | borderline | CYP80B1__00002__sp_O64900_C80B2_ESCCA |
| BEvul08G0010750.1 | Alkaloid | CYP80B1 | medium | borderline | CYP80B1__00003__sp_Q9FXW4_C80B2_COPJA |
| BEvul06G0016830.1 | Alkaloid | CYP80F1 | medium | borderline | CYP80F1__00002__tr_Q1A1B0_Q1A1B0_HYONI |
| BEvul01G0001050.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU |
| BEvul01G0001070.1 | Alkaloid | G8O/G8H | medium | pass | G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU |
| BEvul01G0004610.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU |
| BEvul01G0009210.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU |
| BEvul01G0017360.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO |
| BEvul01G0020450.1 | Alkaloid | G8O/G8H | medium | borderline | G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO |