Betula pendula (betula_pendula)
Imported from atlas release summary for Betula pendula.
1803
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1803
Candidate Genes
C4H
6.36%
C3'H/CYP98A
6.06%
UGT
5.05%
BAHD
4.71%
7DLGT
4.5%
UFGT
4.5%
IFS
4.08%
CYP76
3.91%
Other Families
60.84%
More Families (97)
POD
148
3.45%
T3O
139
3.24%
4CL
123
2.87%
DWF4/CYP90B1
104
2.42%
F3H
96
2.24%
F3'H/CYP75B
92
2.14%
CAD
92
2.14%
BR6OX2/CYP85A2
79
1.84%
TRI/TRII
76
1.77%
STR
75
1.75%
CAS
71
1.65%
NMT
65
1.51%
CODM/T6ODM
61
1.42%
TPS
60
1.4%
GES
56
1.3%
CYP71
53
1.23%
LAC
51
1.19%
SMT1/SMT2/SMT3
50
1.16%
CYP90D1
46
1.07%
T16H
45
1.05%
COMT
44
1.02%
GS
41
0.96%
H6H
40
0.93%
G8O/G8H
39
0.91%
BBE
35
0.82%
HCT
35
0.82%
7DLH
33
0.77%
IFR
33
0.77%
RAS
33
0.77%
CSE
31
0.72%
PAL
30
0.7%
16OMT
29
0.68%
SLS
29
0.68%
PMT
29
0.68%
PYKS
28
0.65%
ANR
25
0.58%
F5H/CYP84A
25
0.58%
TAT
23
0.54%
BR6OX1/CYP85A1
23
0.54%
IO
22
0.51%
FNS
21
0.49%
CCR
21
0.49%
SGD
20
0.47%
COR
20
0.47%
NCS
19
0.44%
CYP51G1
19
0.44%
F3'5'H/CYP75A
18
0.42%
CPD/CYP90A1
17
0.4%
DFR
16
0.37%
8HGO
12
0.28%
ANS/LDOX
11
0.26%
CPR
11
0.26%
ROT3/CYP90C1
11
0.26%
FPPS
11
0.26%
TYDC_DDC
10
0.23%
MPO
10
0.23%
CYP80B1
10
0.23%
LAMT
10
0.23%
ISY
9
0.21%
CCoAOMT
9
0.21%
HPPR
8
0.19%
AACT
8
0.19%
GGPPS
8
0.19%
CNMT
7
0.16%
CHI
6
0.14%
ADC
5
0.12%
6OMT_4OMT_SOMT
5
0.12%
CHS
5
0.12%
SQS/FDFT1
5
0.12%
DXS
5
0.12%
MVD
5
0.12%
CYP719
4
0.09%
DWF1
4
0.09%
SQE
4
0.09%
DET2
3
0.07%
HMGS
3
0.07%
HMGR
3
0.07%
MCT/IspD
3
0.07%
MVK
3
0.07%
TDC
2
0.05%
FLS
2
0.05%
SMO1/SMO2
2
0.05%
HYD1
2
0.05%
CPI1
2
0.05%
DXR
2
0.05%
ODC
1
0.02%
CYP80F1
1
0.02%
XMT_MXMT_DXMT
1
0.02%
FK
1
0.02%
DWF5
1
0.02%
DWF7
1
0.02%
IDI
1
0.02%
MDS/IspF
1
0.02%
PMK
1
0.02%
HDR/IspH
1
0.02%
HDS/IspG
1
0.02%
CMK/IspE
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 521 | 19 | UGT (205) | View species results |
| Alkaloid pathway | 397 | 24 | 7DLGT (95) | View species results |
| Phenylpropanoid pathway | 357 | 12 | POD (137) | View species results |
| Flavonoid pathway | 254 | 12 | UFGT (181) | View species results |
| Rosmarinic acid pathway | 155 | 7 | C4H (72) | View species results |
| Steroid pathway | 119 | 14 | CAS (64) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1685 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 270 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| BpenContig3640163130.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| BpenContig3890169890.1 | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| BpenContig39160170460.1 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| BpenContig3950171540.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| BpenContig4120175160.1 | Phenylpropanoid | POD | medium | pass | POD__00020__sp_Q9FE01_APX2_ORYSJ |
| BpenContig4140175410.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| BpenContig42420178030.1 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| BpenContig4410183310.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| BpenContig4430183970.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| BpenContig4490185450.1 | Phenylpropanoid | POD | low | borderline | POD__00006__sp_O22850_GPX3_ARATH |
| BpenContig4490185470.1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| BpenContig5060201180.1 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| BpenContig510203610.1 | Phenylpropanoid | POD | medium | pass | POD__00016__sp_Q6QPJ6_PRXQ_POPJC |
| BpenContig5180205860.1 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| BpenContig5180205870.1 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| BpenContig520207970.1 | Phenylpropanoid | POD | medium | pass | POD__00023__sp_Q9M7T0_PRX2F_ARATH |
| BpenContig5450214780.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| BpenContig550215880.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| BpenContig5660220420.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| BpenContig5680221020.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| BpenContig5770223080.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| BpenContig6050227460.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| BpenContig6050227470.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| BpenContig6390233160.1 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| BpenContig6510234770.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| BpenContig660235950.1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| BpenContig6720238320.1 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| BpenContig6990240280.1 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| BpenContig7020240510.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| BpenContig7530245690.1 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| BpenContig7570246070.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| BpenContig7720247390.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| BpenContig7940250050.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| BpenContig8110253750.1 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| BpenContig8340257770.1 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| BpenContig8480259310.1 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| BpenContig8520259670.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| BpenContig880263720.1 | Phenylpropanoid | POD | medium | pass | POD__00015__sp_Q69SV0_APX8_ORYSJ |
| BpenContig8910266360.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| BpenContig900267450.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| BpenContig900267460.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| BpenContig900267480.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| BpenContig900267490.4 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| BpenContig900267500.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| BpenContig9320271600.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| BpenContig940272450.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| BpenContig9440275260.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| BpenContig9900280400.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |