Bretschneidera sinensis (bretschneidera_sinensis)
Imported from atlas release summary for Bretschneidera sinensis.
2121
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2121
Candidate Genes
C4H
5.76%
BAHD
5.44%
C3'H/CYP98A
4.79%
POD
4.48%
UGT
4.12%
F3H
3.99%
CYP76
3.93%
4CL
3.6%
Other Families
63.89%
More Families (98)
7DLGT
187
3.57%
UFGT
174
3.32%
IFS
162
3.09%
NMT
155
2.96%
CODM/T6ODM
150
2.86%
T3O
123
2.35%
DWF4/CYP90B1
105
2.0%
STR
102
1.95%
F3'H/CYP75B
98
1.87%
CSE
85
1.62%
H6H
74
1.41%
CAD
74
1.41%
BR6OX2/CYP85A2
73
1.39%
HCT
66
1.26%
CAS
59
1.13%
COMT
57
1.09%
G8O/G8H
56
1.07%
T16H
56
1.07%
IO
52
0.99%
LAC
51
0.97%
F3'5'H/CYP75A
48
0.92%
TAT
48
0.92%
CYP90D1
48
0.92%
TPS
48
0.92%
GES
47
0.9%
IFR
47
0.9%
CYP71
46
0.88%
SGD
44
0.84%
SMT1/SMT2/SMT3
43
0.82%
BBE
42
0.8%
PYKS
41
0.78%
TRI/TRII
40
0.76%
FNS
40
0.76%
RAS
39
0.74%
GS
34
0.65%
LAMT
34
0.65%
PMT
33
0.63%
7DLH
31
0.59%
F5H/CYP84A
31
0.59%
NCS
30
0.57%
PAL
30
0.57%
BR6OX1/CYP85A1
30
0.57%
CCR
29
0.55%
SQE
28
0.53%
ANR
27
0.51%
ANS/LDOX
24
0.46%
16OMT
22
0.42%
SLS
21
0.4%
CPD/CYP90A1
19
0.36%
8HGO
18
0.34%
DFR
16
0.31%
ROT3/CYP90C1
16
0.31%
CNMT
14
0.27%
CYP719
14
0.27%
CCoAOMT
14
0.27%
SQS/FDFT1
14
0.27%
FPPS
14
0.27%
HPPR
12
0.23%
GGPPS
12
0.23%
AACT
11
0.21%
COR
10
0.19%
CHS
10
0.19%
CPR
10
0.19%
CYP51G1
10
0.19%
MPO
9
0.17%
CYP80B1
9
0.17%
ISY
9
0.17%
SMO1/SMO2
9
0.17%
CHI
8
0.15%
CMK/IspE
8
0.15%
MCT/IspD
8
0.15%
TYDC_DDC
7
0.13%
MVK
7
0.13%
DXS
7
0.13%
TDC
6
0.11%
6OMT_4OMT_SOMT
6
0.11%
HMGR
6
0.11%
XMT_MXMT_DXMT
5
0.1%
DET2
5
0.1%
MVD
5
0.1%
ADC
3
0.06%
FK
3
0.06%
PMK
3
0.06%
DXR
3
0.06%
HMGS
3
0.06%
HDR/IspH
3
0.06%
HDS/IspG
3
0.06%
DWF7
2
0.04%
CPI1
2
0.04%
DWF1
2
0.04%
HYD1
2
0.04%
IDI
2
0.04%
MDS/IspF
2
0.04%
CYP80F1
1
0.02%
ODC
1
0.02%
FLS
1
0.02%
DWF5
1
0.02%
GPPS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 611 | 19 | BAHD (213) | View species results |
| Phenylpropanoid pathway | 511 | 11 | POD (208) | View species results |
| Alkaloid pathway | 445 | 25 | 7DLGT (78) | View species results |
| Flavonoid pathway | 258 | 13 | UFGT (154) | View species results |
| Rosmarinic acid pathway | 171 | 7 | 4CL (42) | View species results |
| Steroid pathway | 125 | 13 | CAS (52) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1808 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 390 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| bretschneidera_sinensis_BsiG0000817.1 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0002757.1 | Alkaloid | 8HGO | medium | pass | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0006618.1 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0006621.1 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0006624.1 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0008952.1 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0016759.1 | Alkaloid | 8HGO | medium | pass | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0020235.1 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0020276.1 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0023568.1 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0024772.1 | Alkaloid | 8HGO | medium | pass | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0026227.1 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0026229.1 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0026230.1 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0026232.1 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0026235.1 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0037342.1 | Alkaloid | 8HGO | medium | borderline | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |
| bretschneidera_sinensis_BsiG0041893.1 | Alkaloid | 8HGO | medium | pass | 8HGO__00001__sp_W8JWV8_8HGO_CATRO |