Bretschneidera sinensis (bretschneidera_sinensis)
Imported from atlas release summary for Bretschneidera sinensis.
2679
Candidate Protein Records
2121
Pathway-Level Records
5243
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5243
Family-Level Calls
C4H
5.76%
BAHD
5.44%
C3'H/CYP98A
4.79%
POD
4.48%
UGT
4.12%
F3H
3.99%
CYP76
3.93%
4CL
3.6%
Other Families
63.89%
More Families (98)
7DLGT
187
3.57%
UFGT
174
3.32%
IFS
162
3.09%
NMT
155
2.96%
CODM/T6ODM
150
2.86%
T3O
123
2.35%
DWF4/CYP90B1
105
2.0%
STR
102
1.95%
F3'H/CYP75B
98
1.87%
CSE
85
1.62%
H6H
74
1.41%
CAD
74
1.41%
BR6OX2/CYP85A2
73
1.39%
HCT
66
1.26%
CAS
59
1.13%
COMT
57
1.09%
G8O/G8H
56
1.07%
T16H
56
1.07%
IO
52
0.99%
LAC
51
0.97%
F3'5'H/CYP75A
48
0.92%
TAT
48
0.92%
CYP90D1
48
0.92%
TPS
48
0.92%
GES
47
0.9%
IFR
47
0.9%
CYP71
46
0.88%
SGD
44
0.84%
SMT1/SMT2/SMT3
43
0.82%
BBE
42
0.8%
PYKS
41
0.78%
TRI/TRII
40
0.76%
FNS
40
0.76%
RAS
39
0.74%
GS
34
0.65%
LAMT
34
0.65%
PMT
33
0.63%
7DLH
31
0.59%
F5H/CYP84A
31
0.59%
NCS
30
0.57%
PAL
30
0.57%
BR6OX1/CYP85A1
30
0.57%
CCR
29
0.55%
SQE
28
0.53%
ANR
27
0.51%
ANS/LDOX
24
0.46%
16OMT
22
0.42%
SLS
21
0.4%
CPD/CYP90A1
19
0.36%
8HGO
18
0.34%
DFR
16
0.31%
ROT3/CYP90C1
16
0.31%
CNMT
14
0.27%
CYP719
14
0.27%
CCoAOMT
14
0.27%
SQS/FDFT1
14
0.27%
FPPS
14
0.27%
HPPR
12
0.23%
GGPPS
12
0.23%
AACT
11
0.21%
COR
10
0.19%
CHS
10
0.19%
CPR
10
0.19%
CYP51G1
10
0.19%
MPO
9
0.17%
CYP80B1
9
0.17%
ISY
9
0.17%
SMO1/SMO2
9
0.17%
CHI
8
0.15%
CMK/IspE
8
0.15%
MCT/IspD
8
0.15%
TYDC_DDC
7
0.13%
MVK
7
0.13%
DXS
7
0.13%
TDC
6
0.11%
6OMT_4OMT_SOMT
6
0.11%
HMGR
6
0.11%
XMT_MXMT_DXMT
5
0.1%
DET2
5
0.1%
MVD
5
0.1%
ADC
3
0.06%
FK
3
0.06%
PMK
3
0.06%
DXR
3
0.06%
HMGS
3
0.06%
HDR/IspH
3
0.06%
HDS/IspG
3
0.06%
DWF7
2
0.04%
CPI1
2
0.04%
DWF1
2
0.04%
HYD1
2
0.04%
IDI
2
0.04%
MDS/IspF
2
0.04%
CYP80F1
1
0.02%
ODC
1
0.02%
FLS
1
0.02%
DWF5
1
0.02%
GPPS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 611 | 19 | BAHD (213) | View species results |
| Phenylpropanoid pathway | 511 | 11 | POD (208) | View species results |
| Alkaloid pathway | 445 | 25 | 7DLGT (78) | View species results |
| Flavonoid pathway | 258 | 13 | UFGT (154) | View species results |
| Rosmarinic acid pathway | 171 | 7 | 4CL (42) | View species results |
| Steroid pathway | 125 | 13 | CAS (52) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1808 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 390 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| bretschneidera_sinensis_BsiG0022099.1 | Alkaloid | GES | medium | pass |
| bretschneidera_sinensis_BsiG0032890.1 | Alkaloid | GES | low | borderline |
| bretschneidera_sinensis_BsiG0035439.1 | Alkaloid | GES | medium | pass |
| bretschneidera_sinensis_BsiG0035440.1 | Alkaloid | GES | medium | pass |
| bretschneidera_sinensis_BsiG0035441.1 | Alkaloid | GES | medium | pass |
| bretschneidera_sinensis_BsiG0036081.1 | Alkaloid | GES | medium | pass |
| bretschneidera_sinensis_BsiG0037987.1 | Alkaloid | GES | low | borderline |
| bretschneidera_sinensis_BsiG0037988.1 | Alkaloid | GES | medium | pass |
| bretschneidera_sinensis_BsiG0038156.1 | Alkaloid | GES | low | borderline |
| bretschneidera_sinensis_BsiG0038271.1 | Alkaloid | GES | medium | pass |
| bretschneidera_sinensis_BsiG0002919.1 | Alkaloid | GS | medium | pass |
| bretschneidera_sinensis_BsiG0007317.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0007321.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0007324.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0007815.1 | Alkaloid | GS | medium | pass |
| bretschneidera_sinensis_BsiG0007816.1 | Alkaloid | GS | medium | pass |
| bretschneidera_sinensis_BsiG0008854.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0009004.1 | Alkaloid | GS | high | pass |
| bretschneidera_sinensis_BsiG0010273.1 | Alkaloid | GS | medium | pass |
| bretschneidera_sinensis_BsiG0011223.1 | Alkaloid | GS | high | pass |
| bretschneidera_sinensis_BsiG0011706.1 | Alkaloid | GS | high | pass |
| bretschneidera_sinensis_BsiG0011707.1 | Alkaloid | GS | high | pass |
| bretschneidera_sinensis_BsiG0011709.1 | Alkaloid | GS | high | pass |
| bretschneidera_sinensis_BsiG0012539.1 | Alkaloid | GS | high | pass |
| bretschneidera_sinensis_BsiG0012541.1 | Alkaloid | GS | high | pass |
| bretschneidera_sinensis_BsiG0014447.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0015546.1 | Alkaloid | GS | high | pass |
| bretschneidera_sinensis_BsiG0016814.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0020078.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0021355.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0022075.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0022078.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0023616.1 | Alkaloid | GS | high | pass |
| bretschneidera_sinensis_BsiG0026571.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0027044.1 | Alkaloid | GS | medium | pass |
| bretschneidera_sinensis_BsiG0027077.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0030484.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0032084.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0037490.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0038575.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0040102.1 | Alkaloid | GS | high | pass |
| bretschneidera_sinensis_BsiG0042794.1 | Alkaloid | GS | high | pass |
| bretschneidera_sinensis_BsiG0042795.1 | Alkaloid | GS | low | borderline |
| bretschneidera_sinensis_BsiG0042796.1 | Alkaloid | GS | high | pass |
| bretschneidera_sinensis_BsiG0001992.1 | Alkaloid | H6H | low | borderline |
| bretschneidera_sinensis_BsiG0002673.1 | Alkaloid | H6H | medium | borderline |
| bretschneidera_sinensis_BsiG0002855.1 | Alkaloid | H6H | medium | borderline |
| bretschneidera_sinensis_BsiG0003261.1 | Alkaloid | H6H | medium | borderline |
| bretschneidera_sinensis_BsiG0005949.1 | Alkaloid | H6H | low | borderline |
| bretschneidera_sinensis_BsiG0007326.1 | Alkaloid | H6H | low | borderline |