Calohypnum plumiforme (calohypnum_plumiforme)
Imported from atlas release summary for Calohypnum plumiforme.
867
Candidate Protein Records
524
Pathway-Level Records
1501
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1501
Family-Level Calls
4CL
7.99%
BAHD
6.13%
NMT
4.46%
C3'H/CYP98A
4.4%
PAL
3.6%
C4H
3.53%
T3O
3.0%
IFR
2.86%
Other Families
64.02%
More Families (97)
IFS
41
2.73%
PYKS
37
2.47%
GS
37
2.47%
F3H
37
2.47%
POD
37
2.47%
TRI/TRII
33
2.2%
STR
32
2.13%
UGT
30
2.0%
CHS
28
1.87%
UFGT
27
1.8%
CODM/T6ODM
26
1.73%
7DLGT
26
1.73%
CAD
26
1.73%
CAS
26
1.73%
DWF4/CYP90B1
26
1.73%
SMT1/SMT2/SMT3
21
1.4%
CYP71
20
1.33%
F3'H/CYP75B
18
1.2%
CYP76
18
1.2%
7DLH
17
1.13%
COMT
17
1.13%
CYP90D1
16
1.07%
BR6OX2/CYP85A2
15
1.0%
LAMT
14
0.93%
H6H
13
0.87%
ANR
13
0.87%
CSE
12
0.8%
NCS
11
0.73%
8HGO
11
0.73%
16OMT
11
0.73%
HCT
11
0.73%
SGD
10
0.67%
CNMT
9
0.6%
LAC
9
0.6%
RAS
9
0.6%
CPD/CYP90A1
9
0.6%
TPS
9
0.6%
TDC
8
0.53%
IO
8
0.53%
FNS
8
0.53%
AACT
8
0.53%
GES
7
0.47%
GGPPS
7
0.47%
G8O/G8H
6
0.4%
SLS
6
0.4%
COR
6
0.4%
TAT
6
0.4%
ROT3/CYP90C1
6
0.4%
PMT
5
0.33%
DFR
5
0.33%
CCR
5
0.33%
CPR
5
0.33%
CYP51G1
5
0.33%
CYP80B1
4
0.27%
BBE
4
0.27%
F3'5'H/CYP75A
4
0.27%
DWF5
4
0.27%
SQS/FDFT1
4
0.27%
HDS/IspG
4
0.27%
CYP80F1
3
0.2%
MPO
3
0.2%
ANS/LDOX
3
0.2%
F5H/CYP84A
3
0.2%
DET2
3
0.2%
CPI1
3
0.2%
MDS/IspF
3
0.2%
MVK
3
0.2%
FPPS
3
0.2%
T16H
2
0.13%
TYDC_DDC
2
0.13%
XMT_MXMT_DXMT
2
0.13%
ADC
2
0.13%
6OMT_4OMT_SOMT
2
0.13%
CYP719
2
0.13%
FLS
2
0.13%
CHI
2
0.13%
DWF1
2
0.13%
SQE
2
0.13%
BR6OX1/CYP85A1
2
0.13%
SMO1/SMO2
2
0.13%
HYD1
2
0.13%
MVD
2
0.13%
CMK/IspE
2
0.13%
HDR/IspH
2
0.13%
PMK
2
0.13%
MCT/IspD
2
0.13%
ISY
1
0.07%
CCoAOMT
1
0.07%
HPPR
1
0.07%
DWF7
1
0.07%
FK
1
0.07%
HMGR
1
0.07%
GPPS
1
0.07%
DXR
1
0.07%
DXS
1
0.07%
IDI
1
0.07%
HMGS
1
0.07%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Alkaloid pathway | 142 | 17 | NMT (27) | View species results |
| Terpenoid pathway | 107 | 18 | BAHD (48) | View species results |
| Phenylpropanoid pathway | 103 | 9 | POD (30) | View species results |
| Flavonoid pathway | 88 | 9 | CHS (26) | View species results |
| Steroid pathway | 44 | 13 | CAS (18) | View species results |
| Rosmarinic acid pathway | 40 | 7 | PAL (16) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 395 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 112 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| CpluGWHAMMO000008920278420.1 | Alkaloid | TRI/TRII | low | borderline |
| CpluGWHAMMO000009600292180.1 | Alkaloid | TRI/TRII | medium | pass |
| CpluGWHAMMO000009620293030.1 | Alkaloid | TRI/TRII | low | borderline |
| CpluGWHAMMO000009620293080.1 | Alkaloid | TRI/TRII | low | borderline |
| CpluGWHAMMO000009620293260.1 | Alkaloid | TRI/TRII | low | borderline |
| CpluGWHAMMO000009620293460.1 | Alkaloid | TRI/TRII | medium | borderline |
| CpluGWHAMMO000009620293500.1 | Alkaloid | TRI/TRII | low | borderline |
| CpluGWHAMMO000009620293560.1 | Alkaloid | TRI/TRII | low | borderline |
| CpluGWHAMMO000009620293620.1 | Alkaloid | TRI/TRII | low | borderline |
| CpluGWHAMMO000009620293630.1 | Alkaloid | TRI/TRII | low | borderline |
| CpluGWHAMMO000009620294300.1 | Alkaloid | TRI/TRII | low | borderline |
| CpluGWHAMMO000009620294390.1 | Alkaloid | TRI/TRII | low | borderline |
| CpluGWHAMMO000009620294440.1 | Alkaloid | TRI/TRII | low | borderline |
| CpluGWHAMMO000009620294490.1 | Alkaloid | TRI/TRII | low | borderline |
| CpluGWHAMMO000009620294640.1 | Alkaloid | TRI/TRII | low | borderline |
| CpluGWHAMMO000009620294920.1 | Alkaloid | TRI/TRII | low | borderline |
| CpluGWHAMMO000009620295060.1 | Alkaloid | TRI/TRII | medium | borderline |
| CpluGWHAMMO000010340300460.1 | Alkaloid | TRI/TRII | medium | pass |
| CpluGWHAMMO000000780019490.1 | Alkaloid | TYDC_DDC | medium | borderline |
| CpluGWHAMMO000007370254010.1 | Alkaloid | TYDC_DDC | medium | borderline |
| CpluGWHAMMO000001880076060.1 | Alkaloid | XMT_MXMT_DXMT | medium | borderline |
| CpluGWHAMMO000009190283100.1 | Alkaloid | XMT_MXMT_DXMT | low | borderline |