PlantSME Plant secondary metabolism enzyme database

Calohypnum plumiforme (calohypnum_plumiforme)

Imported from atlas release summary for Calohypnum plumiforme.

524
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Alkaloid pathway 142 17 NMT (27) View species results
Terpenoid pathway 107 18 BAHD (48) View species results
Phenylpropanoid pathway 103 9 POD (30) View species results
Flavonoid pathway 88 9 CHS (26) View species results
Steroid pathway 44 13 CAS (18) View species results
Rosmarinic acid pathway 40 7 PAL (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 395 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Gene Pathway Family Confidence Status
CpluGWHAMMO000002250094350.1 Rosmarinic Acid PAL high pass
CpluGWHAMMO000002290096850.1 Rosmarinic Acid PAL high pass
CpluGWHAMMO000002510107030.1 Rosmarinic Acid PAL high pass
CpluGWHAMMO000004740185900.1 Rosmarinic Acid PAL high pass
CpluGWHAMMO000006390232440.1 Rosmarinic Acid PAL high pass
CpluGWHAMMO000006390232450.1 Rosmarinic Acid PAL high pass
CpluGWHAMMO000007410254370.1 Rosmarinic Acid PAL high pass
CpluGWHAMMO000007410254380.1 Rosmarinic Acid PAL high pass
CpluGWHAMMO000007830262640.1 Rosmarinic Acid PAL high pass
CpluGWHAMMO000009070281010.1 Rosmarinic Acid PAL high pass
CpluGWHAMMO000009300286930.1 Rosmarinic Acid PAL high pass
CpluGWHAMMO000001620059860.1 Rosmarinic Acid RAS low borderline
CpluGWHAMMO000002250094080.1 Rosmarinic Acid RAS low borderline
CpluGWHAMMO000002250094110.1 Rosmarinic Acid RAS low borderline
CpluGWHAMMO000003680156190.1 Rosmarinic Acid RAS low borderline
CpluGWHAMMO000005040195800.1 Rosmarinic Acid RAS medium pass
CpluGWHAMMO000005800218340.1 Rosmarinic Acid RAS medium pass
CpluGWHAMMO000005800218400.1 Rosmarinic Acid RAS medium pass
CpluGWHAMMO000007140247870.1 Rosmarinic Acid RAS low borderline
CpluGWHAMMO000007360253450.1 Rosmarinic Acid RAS medium pass
CpluGWHAMMO000001630060360.1 Rosmarinic Acid TAT medium pass
CpluGWHAMMO000002180088860.1 Rosmarinic Acid TAT low borderline
CpluGWHAMMO000002720113910.1 Rosmarinic Acid TAT low borderline
CpluGWHAMMO000005730216020.1 Rosmarinic Acid TAT medium pass
CpluGWHAMMO000007490257670.1 Rosmarinic Acid TAT medium pass
CpluGWHAMMO000009620294570.1 Rosmarinic Acid TAT low borderline