Camellia sinensis (camellia_sinensis)
Imported from atlas release summary for Camellia sinensis.
2616
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2616
Candidate Genes
UGT
6.02%
BAHD
5.93%
C3'H/CYP98A
5.61%
C4H
5.35%
7DLGT
5.29%
UFGT
5.24%
IFS
3.47%
CYP76
3.42%
Other Families
59.67%
More Families (98)
T3O
191
3.1%
F3H
179
2.9%
POD
179
2.9%
4CL
174
2.82%
NMT
134
2.17%
DWF4/CYP90B1
134
2.17%
CAD
130
2.11%
F3'H/CYP75B
118
1.91%
BR6OX2/CYP85A2
98
1.59%
H6H
95
1.54%
SMT1/SMT2/SMT3
94
1.52%
CAS
91
1.48%
CODM/T6ODM
88
1.43%
TPS
78
1.26%
STR
77
1.25%
HCT
77
1.25%
GES
76
1.23%
LAC
70
1.14%
TAT
70
1.14%
GS
60
0.97%
CSE
54
0.88%
ANR
53
0.86%
CYP90D1
50
0.81%
G8O/G8H
49
0.79%
PMT
48
0.78%
IFR
47
0.76%
CYP71
47
0.76%
RAS
46
0.75%
TRI/TRII
45
0.73%
COMT
41
0.66%
NCS
39
0.63%
CCR
39
0.63%
F3'5'H/CYP75A
38
0.62%
7DLH
37
0.6%
PYKS
36
0.58%
T16H
35
0.57%
SLS
35
0.57%
IO
34
0.55%
CPD/CYP90A1
34
0.55%
SGD
32
0.52%
FNS
32
0.52%
BR6OX1/CYP85A1
31
0.5%
SQE
29
0.47%
LAMT
27
0.44%
CYP51G1
26
0.42%
16OMT
25
0.41%
CPR
25
0.41%
CYP719
23
0.37%
COR
23
0.37%
DFR
23
0.37%
F5H/CYP84A
21
0.34%
BBE
19
0.31%
ROT3/CYP90C1
19
0.31%
8HGO
18
0.29%
PAL
18
0.29%
MCT/IspD
17
0.28%
ANS/LDOX
16
0.26%
HMGR
16
0.26%
CHS
12
0.19%
AACT
12
0.19%
CNMT
11
0.18%
CCoAOMT
11
0.18%
MPO
10
0.16%
TDC
9
0.15%
DXS
9
0.15%
GGPPS
9
0.15%
FPPS
9
0.15%
TYDC_DDC
8
0.13%
HMGS
8
0.13%
CYP80B1
7
0.11%
CHI
7
0.11%
HPPR
7
0.11%
PMK
7
0.11%
6OMT_4OMT_SOMT
6
0.1%
DET2
6
0.1%
MVK
6
0.1%
ADC
5
0.08%
ISY
5
0.08%
SQS/FDFT1
5
0.08%
SMO1/SMO2
5
0.08%
MVD
5
0.08%
MDS/IspF
5
0.08%
ODC
4
0.06%
HYD1
4
0.06%
DWF1
3
0.05%
DXR
3
0.05%
CMK/IspE
3
0.05%
XMT_MXMT_DXMT
2
0.03%
CYP80F1
2
0.03%
FLS
2
0.03%
DWF7
2
0.03%
CPI1
2
0.03%
FK
2
0.03%
IDI
2
0.03%
HDS/IspG
2
0.03%
DWF5
1
0.02%
GPPS
1
0.02%
HDR/IspH
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 831 | 20 | UGT (352) | View species results |
| Alkaloid pathway | 569 | 26 | 7DLGT (158) | View species results |
| Phenylpropanoid pathway | 442 | 11 | POD (155) | View species results |
| Flavonoid pathway | 397 | 12 | UFGT (295) | View species results |
| Rosmarinic acid pathway | 217 | 7 | C4H (83) | View species results |
| Steroid pathway | 160 | 13 | CAS (65) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2130 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 489 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| camellia_sinensis_GWHPASIV000402 | Flavonoid | PAL | high | pass | PAL__00005__sp_Q50EX7_PAL1_PETHY |
| camellia_sinensis_GWHPASIV014419 | Flavonoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| camellia_sinensis_GWHPASIV023860 | Flavonoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| camellia_sinensis_GWHPASIV032361 | Flavonoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| camellia_sinensis_GWHPASIV034458 | Flavonoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| camellia_sinensis_GWHPASIV039366 | Flavonoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| camellia_sinensis_GWHPASIV000402 | Phenylpropanoid | PAL | high | pass | PAL__00005__sp_Q50EX7_PAL1_PETHY |
| camellia_sinensis_GWHPASIV014419 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| camellia_sinensis_GWHPASIV023860 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| camellia_sinensis_GWHPASIV032361 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| camellia_sinensis_GWHPASIV034458 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| camellia_sinensis_GWHPASIV039366 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| camellia_sinensis_GWHPASIV000402 | Rosmarinic Acid | PAL | high | pass | PAL__00005__sp_Q50EX7_PAL1_PETHY |
| camellia_sinensis_GWHPASIV014419 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| camellia_sinensis_GWHPASIV023860 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| camellia_sinensis_GWHPASIV032361 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| camellia_sinensis_GWHPASIV034458 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| camellia_sinensis_GWHPASIV039366 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |