Camellia sinensis (camellia_sinensis)
Imported from atlas release summary for Camellia sinensis.
2871
Candidate Protein Records
2616
Pathway-Level Records
6167
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
6167
Family-Level Calls
UGT
6.02%
BAHD
5.93%
C3'H/CYP98A
5.61%
C4H
5.35%
7DLGT
5.29%
UFGT
5.24%
IFS
3.47%
CYP76
3.42%
Other Families
59.67%
More Families (98)
T3O
191
3.1%
F3H
179
2.9%
POD
179
2.9%
4CL
174
2.82%
NMT
134
2.17%
DWF4/CYP90B1
134
2.17%
CAD
130
2.11%
F3'H/CYP75B
118
1.91%
BR6OX2/CYP85A2
98
1.59%
H6H
95
1.54%
SMT1/SMT2/SMT3
94
1.52%
CAS
91
1.48%
CODM/T6ODM
88
1.43%
TPS
78
1.26%
STR
77
1.25%
HCT
77
1.25%
GES
76
1.23%
LAC
70
1.14%
TAT
70
1.14%
GS
60
0.97%
CSE
54
0.88%
ANR
53
0.86%
CYP90D1
50
0.81%
G8O/G8H
49
0.79%
PMT
48
0.78%
IFR
47
0.76%
CYP71
47
0.76%
RAS
46
0.75%
TRI/TRII
45
0.73%
COMT
41
0.66%
NCS
39
0.63%
CCR
39
0.63%
F3'5'H/CYP75A
38
0.62%
7DLH
37
0.6%
PYKS
36
0.58%
T16H
35
0.57%
SLS
35
0.57%
IO
34
0.55%
CPD/CYP90A1
34
0.55%
SGD
32
0.52%
FNS
32
0.52%
BR6OX1/CYP85A1
31
0.5%
SQE
29
0.47%
LAMT
27
0.44%
CYP51G1
26
0.42%
16OMT
25
0.41%
CPR
25
0.41%
CYP719
23
0.37%
COR
23
0.37%
DFR
23
0.37%
F5H/CYP84A
21
0.34%
BBE
19
0.31%
ROT3/CYP90C1
19
0.31%
8HGO
18
0.29%
PAL
18
0.29%
MCT/IspD
17
0.28%
ANS/LDOX
16
0.26%
HMGR
16
0.26%
CHS
12
0.19%
AACT
12
0.19%
CNMT
11
0.18%
CCoAOMT
11
0.18%
MPO
10
0.16%
TDC
9
0.15%
DXS
9
0.15%
GGPPS
9
0.15%
FPPS
9
0.15%
TYDC_DDC
8
0.13%
HMGS
8
0.13%
CYP80B1
7
0.11%
CHI
7
0.11%
HPPR
7
0.11%
PMK
7
0.11%
6OMT_4OMT_SOMT
6
0.1%
DET2
6
0.1%
MVK
6
0.1%
ADC
5
0.08%
ISY
5
0.08%
SQS/FDFT1
5
0.08%
SMO1/SMO2
5
0.08%
MVD
5
0.08%
MDS/IspF
5
0.08%
ODC
4
0.06%
HYD1
4
0.06%
DWF1
3
0.05%
DXR
3
0.05%
CMK/IspE
3
0.05%
XMT_MXMT_DXMT
2
0.03%
CYP80F1
2
0.03%
FLS
2
0.03%
DWF7
2
0.03%
CPI1
2
0.03%
FK
2
0.03%
IDI
2
0.03%
HDS/IspG
2
0.03%
DWF5
1
0.02%
GPPS
1
0.02%
HDR/IspH
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 831 | 20 | UGT (352) | View species results |
| Alkaloid pathway | 569 | 26 | 7DLGT (158) | View species results |
| Phenylpropanoid pathway | 442 | 11 | POD (155) | View species results |
| Flavonoid pathway | 397 | 12 | UFGT (295) | View species results |
| Rosmarinic acid pathway | 217 | 7 | C4H (83) | View species results |
| Steroid pathway | 160 | 13 | CAS (65) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2130 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 489 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| camellia_sinensis_GWHPASIV013803 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV014116 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV014117 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV014623 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV014626 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV014627 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV014628 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV014857 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV015176 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV018377 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV021643 | Alkaloid | TRI/TRII | low | borderline |
| camellia_sinensis_GWHPASIV026150 | Alkaloid | TRI/TRII | low | borderline |
| camellia_sinensis_GWHPASIV026443 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV027646 | Alkaloid | TRI/TRII | low | borderline |
| camellia_sinensis_GWHPASIV031108 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV032010 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV032015 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV032733 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV034178 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV034180 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV035561 | Alkaloid | TRI/TRII | low | borderline |
| camellia_sinensis_GWHPASIV036104 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV036108 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV038919 | Alkaloid | TRI/TRII | low | borderline |
| camellia_sinensis_GWHPASIV039499 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV040067 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV040900 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV040901 | Alkaloid | TRI/TRII | medium | pass |
| camellia_sinensis_GWHPASIV042387 | Alkaloid | TRI/TRII | low | borderline |
| camellia_sinensis_GWHPASIV042389 | Alkaloid | TRI/TRII | low | borderline |
| camellia_sinensis_GWHPASIV042390 | Alkaloid | TRI/TRII | low | borderline |
| camellia_sinensis_GWHPASIV003728 | Alkaloid | TYDC_DDC | low | borderline |
| camellia_sinensis_GWHPASIV004411 | Alkaloid | TYDC_DDC | medium | borderline |
| camellia_sinensis_GWHPASIV004412 | Alkaloid | TYDC_DDC | medium | borderline |
| camellia_sinensis_GWHPASIV022823 | Alkaloid | TYDC_DDC | medium | borderline |
| camellia_sinensis_GWHPASIV026348 | Alkaloid | TYDC_DDC | low | borderline |
| camellia_sinensis_GWHPASIV031606 | Alkaloid | TYDC_DDC | low | borderline |
| camellia_sinensis_GWHPASIV039584 | Alkaloid | TYDC_DDC | medium | borderline |
| camellia_sinensis_GWHPASIV045544 | Alkaloid | TYDC_DDC | medium | borderline |
| camellia_sinensis_GWHPASIV000758 | Alkaloid | XMT_MXMT_DXMT | medium | borderline |
| camellia_sinensis_GWHPASIV001780 | Alkaloid | XMT_MXMT_DXMT | medium | borderline |
| camellia_sinensis_GWHPASIV001851 | Flavonoid | 4CL | medium | pass |
| camellia_sinensis_GWHPASIV002480 | Flavonoid | 4CL | medium | pass |
| camellia_sinensis_GWHPASIV002648 | Flavonoid | 4CL | medium | pass |
| camellia_sinensis_GWHPASIV002668 | Flavonoid | 4CL | medium | pass |
| camellia_sinensis_GWHPASIV002673 | Flavonoid | 4CL | medium | pass |
| camellia_sinensis_GWHPASIV002747 | Flavonoid | 4CL | medium | pass |
| camellia_sinensis_GWHPASIV002748 | Flavonoid | 4CL | medium | pass |
| camellia_sinensis_GWHPASIV002749 | Flavonoid | 4CL | medium | pass |
| camellia_sinensis_GWHPASIV002753 | Flavonoid | 4CL | medium | pass |