PlantSME Plant secondary metabolism enzyme database

Camptotheca acuminata (camptotheca_acuminata)

Imported from atlas release summary for Camptotheca acuminata.

2313
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.88% Alkaloid pathway 26.33% Phenylpropanoid pathway 21.79% Flavonoid pathway 8.86% Steroid pathway 8.08% Rosmarinic acid pathway 6.05%
Family Distribution
BAHD 6.6% C4H 5.56% 4CL 4.83% C3'H/CYP98A 4.52% POD 3.88% UGT 3.41% NMT 3.4% IFS 3.27%
Other Families 64.53%
More Families (95)
CYP76 160 2.86% 7DLGT 156 2.79% STR 155 2.77% F3H 151 2.7% UFGT 135 2.41% DWF4/CYP90B1 133 2.38% T3O 129 2.31% CAD 122 2.18% CAS 100 1.79% CODM/T6ODM 95 1.7% SMT1/SMT2/SMT3 90 1.61% SGD 89 1.59% IFR 83 1.48% F3'H/CYP75B 77 1.38% LAC 77 1.38% GS 73 1.31% CYP71 70 1.25% TRI/TRII 68 1.22% BR6OX2/CYP85A2 67 1.2% GES 65 1.16% TPS 64 1.14% H6H 60 1.07% CSE 55 0.98% NCS 54 0.97% PMT 54 0.97% T16H 51 0.91% 7DLH 51 0.91% RAS 51 0.91% F3'5'H/CYP75A 50 0.89% FNS 48 0.86% G8O/G8H 45 0.8% IO 38 0.68% HCT 38 0.68% 8HGO 37 0.66% SLS 35 0.63% ANS/LDOX 35 0.63% ANR 34 0.61% F5H/CYP84A 34 0.61% CYP90D1 34 0.61% COMT 31 0.55% PYKS 30 0.54% CCR 26 0.46% TAT 26 0.46% ROT3/CYP90C1 26 0.46% LAMT 23 0.41% AACT 23 0.41% CPD/CYP90A1 22 0.39% BR6OX1/CYP85A1 22 0.39% FPPS 22 0.39% BBE 20 0.36% SQE 20 0.36% COR 19 0.34% PAL 18 0.32% 16OMT 17 0.3% MPO 17 0.3% DFR 17 0.3% CNMT 15 0.27% DXS 15 0.27% ISY 14 0.25% CCoAOMT 14 0.25% CPR 14 0.25% CYP51G1 14 0.25% SQS/FDFT1 13 0.23% CYP80B1 11 0.2% TYDC_DDC 11 0.2% SMO1/SMO2 9 0.16% HDS/IspG 9 0.16% HDR/IspH 9 0.16% HPPR 8 0.14% PMK 8 0.14% HMGR 8 0.14% CYP719 7 0.13% GGPPS 7 0.13% CMK/IspE 7 0.13% MCT/IspD 7 0.13% MVD 7 0.13% CHS 5 0.09% CHI 5 0.09% DWF7 5 0.09% 6OMT_4OMT_SOMT 4 0.07% XMT_MXMT_DXMT 4 0.07% FLS 4 0.07% DWF5 4 0.07% MVK 4 0.07% TDC 3 0.05% HYD1 3 0.05% HMGS 3 0.05% DXR 3 0.05% IDI 3 0.05% ODC 2 0.04% ADC 2 0.04% CPI1 2 0.04% FK 2 0.04% DWF1 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 668 19 BAHD (299) View species results
Alkaloid pathway 609 24 NMT (105) View species results
Phenylpropanoid pathway 504 11 POD (203) View species results
Flavonoid pathway 205 13 UFGT (104) View species results
Steroid pathway 187 11 CAS (86) View species results
Rosmarinic acid pathway 140 7 4CL (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1823 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
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Gene Pathway Family Confidence Status Best Target
Cacu01G0020850.1 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Cacu03G0002910.1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Cacu08G0018060.1 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Cacu15G0001010.1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Cacu21G0001040.1 Flavonoid CHS medium pass CHS__00006__sp_P30074_CHS2_MEDSA