Camptotheca acuminata (camptotheca_acuminata)
Imported from atlas release summary for Camptotheca acuminata.
2313
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2313
Candidate Genes
BAHD
6.6%
C4H
5.56%
4CL
4.83%
C3'H/CYP98A
4.52%
POD
3.88%
UGT
3.41%
NMT
3.4%
IFS
3.27%
Other Families
64.53%
More Families (95)
CYP76
160
2.86%
7DLGT
156
2.79%
STR
155
2.77%
F3H
151
2.7%
UFGT
135
2.41%
DWF4/CYP90B1
133
2.38%
T3O
129
2.31%
CAD
122
2.18%
CAS
100
1.79%
CODM/T6ODM
95
1.7%
SMT1/SMT2/SMT3
90
1.61%
SGD
89
1.59%
IFR
83
1.48%
F3'H/CYP75B
77
1.38%
LAC
77
1.38%
GS
73
1.31%
CYP71
70
1.25%
TRI/TRII
68
1.22%
BR6OX2/CYP85A2
67
1.2%
GES
65
1.16%
TPS
64
1.14%
H6H
60
1.07%
CSE
55
0.98%
NCS
54
0.97%
PMT
54
0.97%
T16H
51
0.91%
7DLH
51
0.91%
RAS
51
0.91%
F3'5'H/CYP75A
50
0.89%
FNS
48
0.86%
G8O/G8H
45
0.8%
IO
38
0.68%
HCT
38
0.68%
8HGO
37
0.66%
SLS
35
0.63%
ANS/LDOX
35
0.63%
ANR
34
0.61%
F5H/CYP84A
34
0.61%
CYP90D1
34
0.61%
COMT
31
0.55%
PYKS
30
0.54%
CCR
26
0.46%
TAT
26
0.46%
ROT3/CYP90C1
26
0.46%
LAMT
23
0.41%
AACT
23
0.41%
CPD/CYP90A1
22
0.39%
BR6OX1/CYP85A1
22
0.39%
FPPS
22
0.39%
BBE
20
0.36%
SQE
20
0.36%
COR
19
0.34%
PAL
18
0.32%
16OMT
17
0.3%
MPO
17
0.3%
DFR
17
0.3%
CNMT
15
0.27%
DXS
15
0.27%
ISY
14
0.25%
CCoAOMT
14
0.25%
CPR
14
0.25%
CYP51G1
14
0.25%
SQS/FDFT1
13
0.23%
CYP80B1
11
0.2%
TYDC_DDC
11
0.2%
SMO1/SMO2
9
0.16%
HDS/IspG
9
0.16%
HDR/IspH
9
0.16%
HPPR
8
0.14%
PMK
8
0.14%
HMGR
8
0.14%
CYP719
7
0.13%
GGPPS
7
0.13%
CMK/IspE
7
0.13%
MCT/IspD
7
0.13%
MVD
7
0.13%
CHS
5
0.09%
CHI
5
0.09%
DWF7
5
0.09%
6OMT_4OMT_SOMT
4
0.07%
XMT_MXMT_DXMT
4
0.07%
FLS
4
0.07%
DWF5
4
0.07%
MVK
4
0.07%
TDC
3
0.05%
HYD1
3
0.05%
HMGS
3
0.05%
DXR
3
0.05%
IDI
3
0.05%
ODC
2
0.04%
ADC
2
0.04%
CPI1
2
0.04%
FK
2
0.04%
DWF1
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 668 | 19 | BAHD (299) | View species results |
| Alkaloid pathway | 609 | 24 | NMT (105) | View species results |
| Phenylpropanoid pathway | 504 | 11 | POD (203) | View species results |
| Flavonoid pathway | 205 | 13 | UFGT (104) | View species results |
| Steroid pathway | 187 | 11 | CAS (86) | View species results |
| Rosmarinic acid pathway | 140 | 7 | 4CL (42) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1823 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 458 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cacu01G0003900.1 | Alkaloid | PYKS | low | borderline |
| Cacu01G0006000.1 | Alkaloid | PYKS | low | borderline |
| Cacu01G0015680.1 | Alkaloid | PYKS | low | borderline |
| Cacu01G0020850.1 | Alkaloid | PYKS | high | pass |
| Cacu01G0023530.1 | Alkaloid | PYKS | low | borderline |
| Cacu01G0027620.1 | Alkaloid | PYKS | low | borderline |
| Cacu01G0027650.1 | Alkaloid | PYKS | low | borderline |
| Cacu02G0000040.1 | Alkaloid | PYKS | low | borderline |
| Cacu02G0003640.1 | Alkaloid | PYKS | low | borderline |
| Cacu02G0003640.2 | Alkaloid | PYKS | low | borderline |
| Cacu03G0000180.1 | Alkaloid | PYKS | low | borderline |
| Cacu03G0002910.1 | Alkaloid | PYKS | high | pass |
| Cacu04G0011820.1 | Alkaloid | PYKS | low | borderline |
| Cacu08G0018060.1 | Alkaloid | PYKS | high | pass |
| Cacu09G0007350.1 | Alkaloid | PYKS | low | borderline |
| Cacu10G0008540.1 | Alkaloid | PYKS | low | borderline |
| Cacu13G0001590.1 | Alkaloid | PYKS | low | borderline |
| Cacu13G0005450.1 | Alkaloid | PYKS | low | borderline |
| Cacu13G0009090.1 | Alkaloid | PYKS | low | borderline |
| Cacu14G0003560.1 | Alkaloid | PYKS | low | borderline |
| Cacu14G0008650.1 | Alkaloid | PYKS | low | borderline |
| Cacu15G0001010.1 | Alkaloid | PYKS | high | pass |
| Cacu15G0005270.1 | Alkaloid | PYKS | low | borderline |
| Cacu17G0006670.1 | Alkaloid | PYKS | low | borderline |
| Cacu18G0006050.1 | Alkaloid | PYKS | low | borderline |
| Cacu21G0001040.1 | Alkaloid | PYKS | high | pass |
| Cacu21G0003900.1 | Alkaloid | PYKS | low | borderline |
| Cacu21G0003910.1 | Alkaloid | PYKS | low | borderline |
| Cacu21G0003920.1 | Alkaloid | PYKS | low | borderline |
| CacuCaaContig03750000480.1 | Alkaloid | PYKS | low | borderline |