Capsicum chinense (capsicum_chinense)
Imported from atlas release summary for Capsicum chinense.
1660
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1660
Candidate Genes
C4H
8.03%
C3'H/CYP98A
7.17%
CYP76
4.66%
T3O
4.39%
IFS
4.39%
BAHD
4.29%
4CL
3.77%
POD
3.27%
Other Families
60.03%
More Families (98)
F3H
160
3.09%
F3'H/CYP75B
149
2.88%
DWF4/CYP90B1
149
2.88%
BR6OX2/CYP85A2
137
2.65%
NMT
104
2.01%
H6H
96
1.86%
UGT
96
1.86%
CYP71
94
1.82%
TPS
90
1.74%
STR
87
1.68%
CODM/T6ODM
84
1.62%
GES
79
1.53%
CAD
71
1.37%
COMT
71
1.37%
T16H
68
1.32%
7DLGT
66
1.28%
SMT1/SMT2/SMT3
65
1.26%
CYP90D1
55
1.06%
TRI/TRII
52
1.01%
IO
52
1.01%
UFGT
52
1.01%
F5H/CYP84A
52
1.01%
16OMT
48
0.93%
BBE
46
0.89%
G8O/G8H
45
0.87%
LAC
45
0.87%
TAT
45
0.87%
7DLH
42
0.81%
FNS
42
0.81%
CAS
42
0.81%
CSE
41
0.79%
PYKS
40
0.77%
F3'5'H/CYP75A
39
0.75%
GS
35
0.68%
SLS
34
0.66%
CYP51G1
32
0.62%
IFR
29
0.56%
SGD
27
0.52%
CPD/CYP90A1
26
0.5%
BR6OX1/CYP85A1
26
0.5%
PAL
24
0.46%
NCS
21
0.41%
CCR
21
0.41%
LAMT
20
0.39%
8HGO
20
0.39%
ANR
20
0.39%
6OMT_4OMT_SOMT
15
0.29%
ANS/LDOX
15
0.29%
CHS
15
0.29%
FPPS
15
0.29%
PMT
13
0.25%
CYP80B1
13
0.25%
CNMT
13
0.25%
DFR
13
0.25%
HCT
13
0.25%
RAS
13
0.25%
TYDC_DDC
12
0.23%
HPPR
12
0.23%
XMT_MXMT_DXMT
11
0.21%
MPO
11
0.21%
CPR
11
0.21%
AACT
11
0.21%
COR
10
0.19%
CCoAOMT
10
0.19%
GGPPS
10
0.19%
ISY
9
0.17%
SQS/FDFT1
9
0.17%
HMGR
9
0.17%
ROT3/CYP90C1
8
0.15%
CYP719
7
0.14%
DET2
7
0.14%
ODC
6
0.12%
SMO1/SMO2
6
0.12%
SQE
6
0.12%
HDR/IspH
5
0.1%
HMGS
5
0.1%
FLS
4
0.08%
MVD
4
0.08%
PMK
4
0.08%
TDC
3
0.06%
CHI
3
0.06%
DWF1
3
0.06%
HYD1
3
0.06%
DXS
3
0.06%
IDI
3
0.06%
GPPS
3
0.06%
ADC
2
0.04%
DWF5
2
0.04%
MDS/IspF
2
0.04%
MCT/IspD
2
0.04%
CMK/IspE
2
0.04%
MVK
2
0.04%
HDS/IspG
2
0.04%
CYP80F1
1
0.02%
DWF7
1
0.02%
CPI1
1
0.02%
FK
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 475 | 21 | BAHD (169) | View species results |
| Phenylpropanoid pathway | 395 | 12 | POD (153) | View species results |
| Alkaloid pathway | 376 | 28 | GES (67) | View species results |
| Rosmarinic acid pathway | 190 | 7 | C4H (91) | View species results |
| Flavonoid pathway | 125 | 11 | 4CL (39) | View species results |
| Steroid pathway | 99 | 12 | SMT1/SMT2/SMT3 (45) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2510 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 248 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| CAchiCCv1.2.scaffold10110004510.1 | Terpenoid | UGT | medium | pass | UGT__00021__sp_A7MAS5_75L17_MALDO |
| CAchiCCv1.2.scaffold10110004600.1 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| CAchiCCv1.2.scaffold10260007240.1 | Terpenoid | UGT | low | borderline | UGT__00038__sp_K4CWS6_U75C1_SOLLC |
| CAchiCCv1.2.scaffold1030007830.1 | Terpenoid | UGT | medium | pass | UGT__00080__sp_Q94AB5_U7E12_ARATH |
| CAchiCCv1.2.scaffold11260022240.1 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| CAchiCCv1.2.scaffold11260022250.1 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| CAchiCCv1.2.scaffold11260022260.1 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| CAchiCCv1.2.scaffold11260022270.1 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| CAchiCCv1.2.scaffold11790030960.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| CAchiCCv1.2.scaffold11790030970.1 | Terpenoid | UGT | medium | pass | UGT__00029__sp_D3UAG2_U71K2_PYRCO |
| CAchiCCv1.2.scaffold11960034160.1 | Terpenoid | UGT | low | borderline | UGT__00024__sp_B3VI56_U91D2_STERE |
| CAchiCCv1.2.scaffold11960034170.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| CAchiCCv1.2.scaffold1280046260.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| CAchiCCv1.2.scaffold1280046270.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| CAchiCCv1.2.scaffold1280046300.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| CAchiCCv1.2.scaffold1280046310.1 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| CAchiCCv1.2.scaffold1280046350.1 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| CAchiCCv1.2.scaffold1280046360.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| CAchiCCv1.2.scaffold1280046370.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| CAchiCCv1.2.scaffold1280046380.1 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| CAchiCCv1.2.scaffold13920058520.1 | Terpenoid | UGT | low | borderline | UGT__00055__sp_O48676_U74B1_ARATH |
| CAchiCCv1.2.scaffold14840066820.1 | Terpenoid | UGT | medium | pass | UGT__00060__sp_O82383_U71D1_ARATH |
| CAchiCCv1.2.scaffold14840066850.1 | Terpenoid | UGT | medium | pass | UGT__00077__sp_Q8VZE9_U73B1_ARATH |
| CAchiCCv1.2.scaffold15090069300.1 | Terpenoid | UGT | medium | pass | UGT__00076__sp_Q8L7M0_TUN_ARATH |
| CAchiCCv1.2.scaffold15220070600.1 | Terpenoid | UGT | medium | pass | UGT__00061__sp_P0DO49_U71K3_FRAAN |
| CAchiCCv1.2.scaffold15220070610.1 | Terpenoid | UGT | medium | pass | UGT__00051__sp_O23382_U71B5_ARATH |
| CAchiCCv1.2.scaffold1530070940.1 | Terpenoid | UGT | medium | pass | UGT__00038__sp_K4CWS6_U75C1_SOLLC |
| CAchiCCv1.2.scaffold1570075430.1 | Terpenoid | UGT | medium | pass | UGT__00033__sp_F8WKW8_UGT9_GARJA |
| CAchiCCv1.2.scaffold1680085710.1 | Terpenoid | UGT | medium | pass | UGT__00063__sp_P0DO67_GT943_SIRGR |
| CAchiCCv1.2.scaffold1680085970.1 | Terpenoid | UGT | medium | pass | UGT__00033__sp_F8WKW8_UGT9_GARJA |
| CAchiCCv1.2.scaffold1680085980.1 | Terpenoid | UGT | medium | pass | UGT__00033__sp_F8WKW8_UGT9_GARJA |
| CAchiCCv1.2.scaffold1680086000.1 | Terpenoid | UGT | medium | pass | UGT__00063__sp_P0DO67_GT943_SIRGR |
| CAchiCCv1.2.scaffold1680086010.1 | Terpenoid | UGT | medium | pass | UGT__00033__sp_F8WKW8_UGT9_GARJA |
| CAchiCCv1.2.scaffold1680086020.1 | Terpenoid | UGT | low | borderline | UGT__00063__sp_P0DO67_GT943_SIRGR |
| CAchiCCv1.2.scaffold1750088790.1 | Terpenoid | UGT | medium | pass | UGT__00015__sp_A0A193AU77_GGT24_PUNGR |
| CAchiCCv1.2.scaffold1770089560.1 | Terpenoid | UGT | medium | pass | UGT__00039__sp_K4D3V7_U76E1_SOLLC |
| CAchiCCv1.2.scaffold1770089790.1 | Terpenoid | UGT | medium | pass | UGT__00039__sp_K4D3V7_U76E1_SOLLC |
| CAchiCCv1.2.scaffold190096700.1 | Terpenoid | UGT | low | borderline | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| CAchiCCv1.2.scaffold2160109370.1 | Terpenoid | UGT | low | borderline | UGT__00015__sp_A0A193AU77_GGT24_PUNGR |
| CAchiCCv1.2.scaffold2400121810.1 | Terpenoid | UGT | medium | pass | UGT__00076__sp_Q8L7M0_TUN_ARATH |
| CAchiCCv1.2.scaffold2510126050.1 | Terpenoid | UGT | low | borderline | UGT__00016__sp_A0A193AUF6_GGT23_PUNGR |
| CAchiCCv1.2.scaffold2510126060.1 | Terpenoid | UGT | medium | pass | UGT__00016__sp_A0A193AUF6_GGT23_PUNGR |
| CAchiCCv1.2.scaffold2530126550.1 | Terpenoid | UGT | low | borderline | UGT__00073__sp_Q6VAB4_U76G1_STERE |
| CAchiCCv1.2.scaffold2670134580.1 | Terpenoid | UGT | medium | pass | UGT__00019__sp_A0A2R4LMF9_73C25_BARVU |
| CAchiCCv1.2.scaffold3290156320.1 | Terpenoid | UGT | low | borderline | UGT__00033__sp_F8WKW8_UGT9_GARJA |
| CAchiCCv1.2.scaffold3560164680.1 | Terpenoid | UGT | medium | pass | UGT__00040__sp_K4D422_U73C4_SOLLC |
| CAchiCCv1.2.scaffold3760171960.1 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| CAchiCCv1.2.scaffold3760171970.1 | Terpenoid | UGT | medium | pass | UGT__00041__sp_K4GGT4_73C11_BARVU |
| CAchiCCv1.2.scaffold3870177310.1 | Terpenoid | UGT | low | borderline | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| CAchiCCv1.2.scaffold3870177540.1 | Terpenoid | UGT | medium | pass | UGT__00093__sp_Q9LR44_U75B1_ARATH |