Capsicum chinense (capsicum_chinense)
Imported from atlas release summary for Capsicum chinense.
2329
Candidate Protein Records
1660
Pathway-Level Records
5171
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5171
Family-Level Calls
C4H
8.03%
C3'H/CYP98A
7.17%
CYP76
4.66%
T3O
4.39%
IFS
4.39%
BAHD
4.29%
4CL
3.77%
POD
3.27%
Other Families
60.03%
More Families (98)
F3H
160
3.09%
F3'H/CYP75B
149
2.88%
DWF4/CYP90B1
149
2.88%
BR6OX2/CYP85A2
137
2.65%
NMT
104
2.01%
H6H
96
1.86%
UGT
96
1.86%
CYP71
94
1.82%
TPS
90
1.74%
STR
87
1.68%
CODM/T6ODM
84
1.62%
GES
79
1.53%
CAD
71
1.37%
COMT
71
1.37%
T16H
68
1.32%
7DLGT
66
1.28%
SMT1/SMT2/SMT3
65
1.26%
CYP90D1
55
1.06%
TRI/TRII
52
1.01%
IO
52
1.01%
UFGT
52
1.01%
F5H/CYP84A
52
1.01%
16OMT
48
0.93%
BBE
46
0.89%
G8O/G8H
45
0.87%
LAC
45
0.87%
TAT
45
0.87%
7DLH
42
0.81%
FNS
42
0.81%
CAS
42
0.81%
CSE
41
0.79%
PYKS
40
0.77%
F3'5'H/CYP75A
39
0.75%
GS
35
0.68%
SLS
34
0.66%
CYP51G1
32
0.62%
IFR
29
0.56%
SGD
27
0.52%
CPD/CYP90A1
26
0.5%
BR6OX1/CYP85A1
26
0.5%
PAL
24
0.46%
NCS
21
0.41%
CCR
21
0.41%
LAMT
20
0.39%
8HGO
20
0.39%
ANR
20
0.39%
6OMT_4OMT_SOMT
15
0.29%
ANS/LDOX
15
0.29%
CHS
15
0.29%
FPPS
15
0.29%
PMT
13
0.25%
CYP80B1
13
0.25%
CNMT
13
0.25%
DFR
13
0.25%
HCT
13
0.25%
RAS
13
0.25%
TYDC_DDC
12
0.23%
HPPR
12
0.23%
XMT_MXMT_DXMT
11
0.21%
MPO
11
0.21%
CPR
11
0.21%
AACT
11
0.21%
COR
10
0.19%
CCoAOMT
10
0.19%
GGPPS
10
0.19%
ISY
9
0.17%
SQS/FDFT1
9
0.17%
HMGR
9
0.17%
ROT3/CYP90C1
8
0.15%
CYP719
7
0.14%
DET2
7
0.14%
ODC
6
0.12%
SMO1/SMO2
6
0.12%
SQE
6
0.12%
HDR/IspH
5
0.1%
HMGS
5
0.1%
FLS
4
0.08%
MVD
4
0.08%
PMK
4
0.08%
TDC
3
0.06%
CHI
3
0.06%
DWF1
3
0.06%
HYD1
3
0.06%
DXS
3
0.06%
IDI
3
0.06%
GPPS
3
0.06%
ADC
2
0.04%
DWF5
2
0.04%
MDS/IspF
2
0.04%
MCT/IspD
2
0.04%
CMK/IspE
2
0.04%
MVK
2
0.04%
HDS/IspG
2
0.04%
CYP80F1
1
0.02%
DWF7
1
0.02%
CPI1
1
0.02%
FK
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 475 | 21 | BAHD (169) | View species results |
| Phenylpropanoid pathway | 395 | 12 | POD (153) | View species results |
| Alkaloid pathway | 376 | 28 | GES (67) | View species results |
| Rosmarinic acid pathway | 190 | 7 | C4H (91) | View species results |
| Flavonoid pathway | 125 | 11 | 4CL (39) | View species results |
| Steroid pathway | 99 | 12 | SMT1/SMT2/SMT3 (45) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2510 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 248 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| CAchiCCv1.2.scaffold6540266110.1 | Terpenoid | UGT | low | borderline | UGT__00039__sp_K4D3V7_U76E1_SOLLC |
| CAchiCCv1.2.scaffold6700270570.1 | Terpenoid | UGT | medium | pass | UGT__00050__sp_O22822_U74F2_ARATH |
| CAchiCCv1.2.scaffold6700270600.1 | Terpenoid | UGT | medium | pass | UGT__00071__sp_Q6VAA6_U74G1_STERE |
| CAchiCCv1.2.scaffold6700270610.1 | Terpenoid | UGT | medium | pass | UGT__00071__sp_Q6VAA6_U74G1_STERE |
| CAchiCCv1.2.scaffold670270450.1 | Terpenoid | UGT | medium | pass | UGT__00028__sp_D3UAG1_U7A16_PYRCO |
| CAchiCCv1.2.scaffold670270460.1 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| CAchiCCv1.2.scaffold6930278180.1 | Terpenoid | UGT | low | borderline | UGT__00033__sp_F8WKW8_UGT9_GARJA |
| CAchiCCv1.2.scaffold7000282130.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| CAchiCCv1.2.scaffold7000282140.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| CAchiCCv1.2.scaffold7000282150.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| CAchiCCv1.2.scaffold7000282170.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| CAchiCCv1.2.scaffold7000282180.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| CAchiCCv1.2.scaffold7110287530.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| CAchiCCv1.2.scaffold7160288510.1 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| CAchiCCv1.2.scaffold720289400.1 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| CAchiCCv1.2.scaffold7230290080.1 | Terpenoid | UGT | low | borderline | UGT__00060__sp_O82383_U71D1_ARATH |
| CAchiCCv1.2.scaffold7560298040.1 | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| CAchiCCv1.2.scaffold7560298050.1 | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| CAchiCCv1.2.scaffold7670300230.1 | Terpenoid | UGT | medium | pass | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| CAchiCCv1.2.scaffold7720301090.1 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| CAchiCCv1.2.scaffold7720301230.1 | Terpenoid | UGT | low | borderline | UGT__00098__sp_Q9LTH2_U76E2_ARATH |
| CAchiCCv1.2.scaffold7940307340.1 | Terpenoid | UGT | medium | pass | UGT__00063__sp_P0DO67_GT943_SIRGR |
| CAchiCCv1.2.scaffold9310340100.1 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| CAchiCCv1.2.scaffold9310340120.1 | Terpenoid | UGT | low | borderline | UGT__00013__sp_A0A172J2D0_UGT2_PUEML |
| CAchiCCv1.2.scaffold9310340130.1 | Terpenoid | UGT | low | borderline | UGT__00013__sp_A0A172J2D0_UGT2_PUEML |
| CAchiCCv1.2.scaffold9530343210.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |