Carica papaya (carica_papaya)
Imported from atlas release summary for Carica papaya.
1322
Candidate Protein Records
1083
Pathway-Level Records
2611
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2611
Family-Level Calls
BAHD
6.36%
C3'H/CYP98A
6.13%
C4H
6.05%
IFS
4.25%
POD
4.1%
4CL
3.91%
CYP76
3.56%
T3O
3.52%
Other Families
62.12%
More Families (96)
UGT
91
3.49%
7DLGT
86
3.29%
UFGT
83
3.18%
F3H
74
2.83%
NMT
67
2.57%
DWF4/CYP90B1
58
2.22%
STR
51
1.95%
H6H
48
1.84%
CAD
45
1.72%
BR6OX2/CYP85A2
45
1.72%
CSE
44
1.69%
F3'H/CYP75B
39
1.49%
TRI/TRII
36
1.38%
CYP71
36
1.38%
CODM/T6ODM
33
1.26%
SMT1/SMT2/SMT3
33
1.26%
LAC
32
1.23%
HCT
30
1.15%
GS
25
0.96%
T16H
25
0.96%
CAS
25
0.96%
SGD
24
0.92%
IFR
24
0.92%
PYKS
23
0.88%
TPS
23
0.88%
BBE
22
0.84%
CYP90D1
22
0.84%
GES
20
0.77%
RAS
20
0.77%
LAMT
19
0.73%
ANR
18
0.69%
TAT
17
0.65%
PMT
16
0.61%
BR6OX1/CYP85A1
16
0.61%
7DLH
15
0.57%
F3'5'H/CYP75A
15
0.57%
PAL
15
0.57%
SLS
14
0.54%
8HGO
14
0.54%
COR
14
0.54%
COMT
14
0.54%
IO
13
0.5%
CYP51G1
12
0.46%
NCS
11
0.42%
CCR
11
0.42%
G8O/G8H
10
0.38%
16OMT
10
0.38%
FNS
10
0.38%
FPPS
10
0.38%
ROT3/CYP90C1
9
0.34%
CPD/CYP90A1
9
0.34%
CNMT
8
0.31%
CYP719
8
0.31%
ANS/LDOX
8
0.31%
TYDC_DDC
6
0.23%
MPO
6
0.23%
CHS
6
0.23%
F5H/CYP84A
6
0.23%
SQS/FDFT1
6
0.23%
CHI
5
0.19%
FLS
5
0.19%
GGPPS
5
0.19%
AACT
5
0.19%
CYP80F1
4
0.15%
DFR
4
0.15%
CCoAOMT
4
0.15%
CPR
4
0.15%
HPPR
4
0.15%
DET2
4
0.15%
MVK
4
0.15%
ISY
3
0.11%
SMO1/SMO2
3
0.11%
FK
3
0.11%
HMGR
3
0.11%
MVD
3
0.11%
DXS
3
0.11%
XMT_MXMT_DXMT
2
0.08%
CYP80B1
2
0.08%
ADC
2
0.08%
SQE
2
0.08%
MCT/IspD
2
0.08%
PMK
2
0.08%
ODC
1
0.04%
6OMT_4OMT_SOMT
1
0.04%
DWF7
1
0.04%
HYD1
1
0.04%
DWF5
1
0.04%
DWF1
1
0.04%
CPI1
1
0.04%
IDI
1
0.04%
HDS/IspG
1
0.04%
HMGS
1
0.04%
MDS/IspF
1
0.04%
CMK/IspE
1
0.04%
HDR/IspH
1
0.04%
DXR
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 308 | 19 | BAHD (133) | View species results |
| Alkaloid pathway | 250 | 18 | 7DLGT (49) | View species results |
| Phenylpropanoid pathway | 241 | 11 | POD (105) | View species results |
| Flavonoid pathway | 128 | 9 | UFGT (81) | View species results |
| Rosmarinic acid pathway | 99 | 7 | C4H (45) | View species results |
| Steroid pathway | 57 | 13 | CAS (21) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 972 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 216 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| carica_papaya_GWHPBFSC020703 | Alkaloid | SGD | medium | pass |
| carica_papaya_GWHPBFSC022791 | Alkaloid | SGD | medium | pass |
| carica_papaya_GWHPBFSC024068 | Alkaloid | SGD | medium | pass |
| carica_papaya_GWHPBFSC024432 | Alkaloid | SGD | low | borderline |
| carica_papaya_GWHPBFSC024434 | Alkaloid | SGD | medium | pass |
| carica_papaya_GWHPBFSC000068 | Alkaloid | SLS | medium | borderline |
| carica_papaya_GWHPBFSC001221 | Alkaloid | SLS | medium | borderline |
| carica_papaya_GWHPBFSC001664 | Alkaloid | SLS | low | borderline |
| carica_papaya_GWHPBFSC002093 | Alkaloid | SLS | medium | borderline |
| carica_papaya_GWHPBFSC007888 | Alkaloid | SLS | medium | borderline |
| carica_papaya_GWHPBFSC011080 | Alkaloid | SLS | medium | borderline |
| carica_papaya_GWHPBFSC012669 | Alkaloid | SLS | medium | borderline |
| carica_papaya_GWHPBFSC012670 | Alkaloid | SLS | medium | borderline |
| carica_papaya_GWHPBFSC012672 | Alkaloid | SLS | medium | borderline |
| carica_papaya_GWHPBFSC012673 | Alkaloid | SLS | medium | borderline |
| carica_papaya_GWHPBFSC018621 | Alkaloid | SLS | medium | borderline |
| carica_papaya_GWHPBFSC018986 | Alkaloid | SLS | medium | borderline |
| carica_papaya_GWHPBFSC019571 | Alkaloid | SLS | medium | borderline |
| carica_papaya_GWHPBFSC021648 | Alkaloid | SLS | medium | borderline |
| carica_papaya_GWHPBFSC001815 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC003530 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC003920 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC003990 | Alkaloid | STR | medium | pass |
| carica_papaya_GWHPBFSC004457 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC004458 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC004459 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC004460 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC004707 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC004822 | Alkaloid | STR | medium | pass |
| carica_papaya_GWHPBFSC005428 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC005914 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC006046 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC006131 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC006132 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC006133 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC006511 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC006512 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC006567 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC009272 | Alkaloid | STR | medium | pass |
| carica_papaya_GWHPBFSC010786 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC011498 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC011711 | Alkaloid | STR | medium | pass |
| carica_papaya_GWHPBFSC011846 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC011943 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC011944 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC012338 | Alkaloid | STR | medium | pass |
| carica_papaya_GWHPBFSC014111 | Alkaloid | STR | low | borderline |
| carica_papaya_GWHPBFSC014198 | Alkaloid | STR | medium | pass |
| carica_papaya_GWHPBFSC014481 | Alkaloid | STR | medium | pass |
| carica_papaya_GWHPBFSC014482 | Alkaloid | STR | medium | pass |