Carpinus fangiana (carpinus_fangiana)
Imported from atlas release summary for Carpinus fangiana.
1783
Candidate Protein Records
1423
Pathway-Level Records
3710
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3710
Family-Level Calls
C4H
6.5%
C3'H/CYP98A
5.9%
BAHD
5.61%
4CL
4.69%
UGT
4.02%
CYP76
3.85%
7DLGT
3.23%
IFS
3.21%
Other Families
62.99%
More Families (94)
POD
114
3.07%
T3O
105
2.83%
F3H
99
2.67%
UFGT
94
2.53%
DWF4/CYP90B1
86
2.32%
CAD
84
2.26%
F3'H/CYP75B
82
2.21%
NMT
69
1.86%
STR
67
1.81%
CODM/T6ODM
63
1.7%
BR6OX2/CYP85A2
62
1.67%
GS
60
1.62%
TRI/TRII
58
1.56%
G8O/G8H
57
1.54%
LAC
53
1.43%
SMT1/SMT2/SMT3
53
1.43%
CAS
48
1.29%
COMT
47
1.27%
HCT
46
1.24%
H6H
43
1.16%
FNS
39
1.05%
PMT
38
1.02%
CYP71
37
1.0%
T16H
36
0.97%
GES
35
0.94%
IFR
35
0.94%
TPS
35
0.94%
TAT
31
0.84%
BBE
28
0.75%
PYKS
27
0.73%
RAS
27
0.73%
16OMT
26
0.7%
COR
26
0.7%
7DLH
25
0.67%
F3'5'H/CYP75A
23
0.62%
ANR
22
0.59%
SGD
21
0.57%
IO
19
0.51%
CCR
19
0.51%
PAL
18
0.49%
CYP90D1
17
0.46%
CPD/CYP90A1
17
0.46%
CSE
16
0.43%
BR6OX1/CYP85A1
16
0.43%
NCS
15
0.4%
SLS
14
0.38%
8HGO
14
0.38%
DFR
14
0.38%
FPPS
12
0.32%
CNMT
11
0.3%
ANS/LDOX
11
0.3%
F5H/CYP84A
11
0.3%
CYP51G1
11
0.3%
MPO
10
0.27%
CCoAOMT
10
0.27%
AACT
10
0.27%
CYP719
9
0.24%
LAMT
9
0.24%
CYP80B1
9
0.24%
CHS
9
0.24%
CPR
9
0.24%
SQS/FDFT1
9
0.24%
HMGR
8
0.22%
TYDC_DDC
7
0.19%
6OMT_4OMT_SOMT
7
0.19%
HPPR
7
0.19%
ROT3/CYP90C1
7
0.19%
ISY
6
0.16%
GGPPS
6
0.16%
ADC
5
0.13%
SQE
5
0.13%
MVK
5
0.13%
MVD
5
0.13%
TDC
4
0.11%
CYP80F1
4
0.11%
CHI
4
0.11%
HYD1
4
0.11%
SMO1/SMO2
4
0.11%
DXS
4
0.11%
DET2
3
0.08%
HMGS
3
0.08%
MDS/IspF
3
0.08%
ODC
2
0.05%
DWF5
2
0.05%
MCT/IspD
2
0.05%
HDS/IspG
2
0.05%
XMT_MXMT_DXMT
1
0.03%
FK
1
0.03%
DWF1
1
0.03%
PMK
1
0.03%
HDR/IspH
1
0.03%
IDI
1
0.03%
CMK/IspE
1
0.03%
DXR
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 429 | 18 | BAHD (160) | View species results |
| Alkaloid pathway | 328 | 23 | T3O (43) | View species results |
| Phenylpropanoid pathway | 307 | 12 | POD (99) | View species results |
| Flavonoid pathway | 152 | 11 | UFGT (77) | View species results |
| Rosmarinic acid pathway | 120 | 7 | 4CL (35) | View species results |
| Steroid pathway | 87 | 9 | CAS (40) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1369 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 281 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cfan02G0024590.1 | Terpenoid | DXS | medium | pass |
| Cfan05G0013250.1 | Terpenoid | DXS | medium | pass |
| Cfan05G0016650.1 | Terpenoid | DXS | medium | pass |
| Cfan06G0013320.1 | Terpenoid | DXS | medium | pass |
| Cfan01G0000200.1 | Terpenoid | FPPS | medium | pass |
| Cfan01G0023320.1 | Terpenoid | FPPS | low | borderline |
| Cfan01G0024170.1 | Terpenoid | FPPS | medium | pass |
| Cfan02G0009040.1 | Terpenoid | FPPS | medium | borderline |
| Cfan02G0017130.1 | Terpenoid | FPPS | low | borderline |
| Cfan02G0026660.2 | Terpenoid | FPPS | low | borderline |
| Cfan02G0026670.1 | Terpenoid | FPPS | low | borderline |
| Cfan04G0022070.1 | Terpenoid | FPPS | medium | pass |
| Cfanscaffold100002450.1 | Terpenoid | FPPS | medium | pass |
| Cfanscaffold11240008530.1 | Terpenoid | FPPS | low | borderline |
| Cfanscaffold90058770.1 | Terpenoid | FPPS | low | borderline |
| Cfanscaffold90058780.1 | Terpenoid | FPPS | low | borderline |
| Cfan01G0042660.1 | Terpenoid | GGPPS | medium | borderline |
| Cfan03G0006980.1 | Terpenoid | GGPPS | medium | borderline |
| Cfan08G0008070.1 | Terpenoid | GGPPS | medium | borderline |
| Cfan08G0016510.1 | Terpenoid | GGPPS | medium | borderline |
| Cfanscaffold360040880.1 | Terpenoid | GGPPS | medium | borderline |
| Cfanscaffold380042370.1 | Terpenoid | GGPPS | low | borderline |
| Cfan02G0005660.1 | Terpenoid | HDR/IspH | high | pass |
| Cfan04G0018390.1 | Terpenoid | HDS/IspG | high | pass |
| Cfanscaffold1660031110.1 | Terpenoid | HDS/IspG | low | borderline |
| Cfan02G0009920.1 | Terpenoid | HMGR | medium | pass |
| Cfan02G0013920.1 | Terpenoid | HMGR | low | borderline |
| Cfan02G0027060.1 | Terpenoid | HMGR | medium | pass |
| Cfan05G0004120.1 | Terpenoid | HMGR | low | borderline |
| Cfan05G0022780.1 | Terpenoid | HMGR | medium | pass |
| Cfan07G0000640.1 | Terpenoid | HMGR | low | borderline |
| Cfanscaffold140022660.1 | Terpenoid | HMGR | medium | pass |
| Cfanscaffold450043950.1 | Terpenoid | HMGR | low | borderline |
| Cfan03G0011360.1 | Terpenoid | HMGS | high | pass |
| Cfan05G0002260.1 | Terpenoid | HMGS | high | pass |
| Cfanscaffold3600041500.1 | Terpenoid | HMGS | medium | pass |
| Cfan02G0018520.1 | Terpenoid | IDI | medium | pass |
| Cfan02G0000180.1 | Terpenoid | MCT/IspD | high | pass |
| Cfanscaffold130017560.1 | Terpenoid | MCT/IspD | low | borderline |
| Cfan05G0003760.1 | Terpenoid | MDS/IspF | high | pass |
| Cfan05G0003790.1 | Terpenoid | MDS/IspF | high | pass |
| Cfan05G0003800.1 | Terpenoid | MDS/IspF | medium | pass |
| Cfan02G0020700.1 | Terpenoid | MVD | low | borderline |
| Cfan04G0008400.1 | Terpenoid | MVD | medium | pass |
| Cfan04G0009380.1 | Terpenoid | MVD | low | borderline |
| Cfan04G0017910.1 | Terpenoid | MVD | low | borderline |
| Cfanscaffold120009050.1 | Terpenoid | MVD | medium | pass |
| Cfan02G0009680.1 | Terpenoid | MVK | low | borderline |
| Cfan02G0021700.1 | Terpenoid | MVK | medium | pass |
| Cfan02G0026500.1 | Terpenoid | MVK | medium | pass |