PlantSME Plant secondary metabolism enzyme database

Castanea mollissima (castanea_mollissima)

Imported from atlas release summary for Castanea mollissima.

2636
Candidate Protein Records
2491
Pathway-Level Records
5659
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 33.76% Alkaloid pathway 22.48% Phenylpropanoid pathway 16.62% Flavonoid pathway 15.94% Rosmarinic acid pathway 6.18% Steroid pathway 5.02%
Family Distribution
C4H 7.19% UGT 6.93% 7DLGT 6.11% UFGT 5.81% BAHD 5.57% C3'H/CYP98A 4.68% CYP76 4.24% POD 2.95%
Other Families 56.51%
More Families (97)
IFS 163 2.88% 4CL 150 2.65% F3'H/CYP75B 120 2.12% G8O/G8H 119 2.1% F3H 117 2.07% T3O 104 1.84% DWF4/CYP90B1 94 1.66% CAD 88 1.56% NMT 87 1.54% STR 85 1.5% T16H 80 1.41% FNS 79 1.4% TRI/TRII 78 1.38% BR6OX2/CYP85A2 77 1.36% HCT 68 1.2% H6H 66 1.17% F5H/CYP84A 65 1.15% CAS 63 1.11% CODM/T6ODM 58 1.02% TAT 57 1.01% COMT 55 0.97% LAC 55 0.97% SMT1/SMT2/SMT3 54 0.95% CYP71 51 0.9% TPS 48 0.85% GES 46 0.81% GS 45 0.8% 7DLH 45 0.8% CSE 44 0.78% NCS 43 0.76% F3'5'H/CYP75A 43 0.76% BBE 42 0.74% IFR 41 0.72% SGD 40 0.71% 16OMT 37 0.65% ANR 35 0.62% CYP90D1 35 0.62% RAS 33 0.58% SLS 30 0.53% PMT 30 0.53% IO 29 0.51% CPD/CYP90A1 28 0.49% PYKS 26 0.46% LAMT 25 0.44% CCR 22 0.39% BR6OX1/CYP85A1 22 0.39% PAL 21 0.37% ISY 20 0.35% MPO 20 0.35% 8HGO 19 0.34% TYDC_DDC 18 0.32% COR 17 0.3% CYP80B1 17 0.3% CYP719 16 0.28% DFR 13 0.23% ROT3/CYP90C1 13 0.23% FPPS 12 0.21% CNMT 11 0.19% ANS/LDOX 11 0.19% GGPPS 11 0.19% 6OMT_4OMT_SOMT 10 0.18% HPPR 10 0.18% HMGR 9 0.16% CYP80F1 8 0.14% SQS/FDFT1 8 0.14% SQE 8 0.14% AACT 8 0.14% CCoAOMT 7 0.12% TDC 6 0.11% XMT_MXMT_DXMT 6 0.11% CYP51G1 6 0.11% DET2 6 0.11% DXS 6 0.11% CPR 5 0.09% MCT/IspD 5 0.09% CHS 4 0.07% MVD 4 0.07% ODC 3 0.05% CHI 3 0.05% SMO1/SMO2 3 0.05% MVK 3 0.05% DXR 3 0.05% CMK/IspE 3 0.05% HDR/IspH 3 0.05% IDI 3 0.05% FLS 2 0.04% CPI1 2 0.04% DWF5 2 0.04% HMGS 2 0.04% PMK 2 0.04% ADC 1 0.02% HYD1 1 0.02% DWF1 1 0.02% FK 1 0.02% DWF7 1 0.02% MDS/IspF 1 0.02% HDS/IspG 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 841 20 UGT (357) View species results
Alkaloid pathway 560 25 7DLGT (170) View species results
Phenylpropanoid pathway 414 13 POD (152) View species results
Flavonoid pathway 397 13 UFGT (302) View species results
Rosmarinic acid pathway 154 7 TAT (47) View species results
Steroid pathway 125 12 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2077 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 416 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Cmolctg11820327080.1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Cmolctg12220328890.1 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Cmolctg12220328900.1 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
Cmolctg13200333250.1 Terpenoid BAHD low borderline BAHD__00014__sp_B9RK42_GPC1_RICCO
Cmolctg13540334610.1 Terpenoid BAHD medium pass BAHD__00037__sp_Q3EBC2_ZDHC5_ARATH
Cmolctg14640338790.1 Terpenoid BAHD low borderline BAHD__00087__sp_Q9M3B1_WSD6_ARATH
Cmolctg15390341460.1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Cmolctg16760345470.1 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
Cmolctg16990346070.1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Cmolctg19920353090.1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Cmolctg19990353220.1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Cmolctg22220358830.1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Cmolctg23240361280.1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Cmolctg23240361290.1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Cmolctg23400361550.1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH