Castanea mollissima (castanea_mollissima)
Imported from atlas release summary for Castanea mollissima.
2491
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2491
Candidate Genes
C4H
7.19%
UGT
6.93%
7DLGT
6.11%
UFGT
5.81%
BAHD
5.57%
C3'H/CYP98A
4.68%
CYP76
4.24%
POD
2.95%
Other Families
56.51%
More Families (97)
IFS
163
2.88%
4CL
150
2.65%
F3'H/CYP75B
120
2.12%
G8O/G8H
119
2.1%
F3H
117
2.07%
T3O
104
1.84%
DWF4/CYP90B1
94
1.66%
CAD
88
1.56%
NMT
87
1.54%
STR
85
1.5%
T16H
80
1.41%
FNS
79
1.4%
TRI/TRII
78
1.38%
BR6OX2/CYP85A2
77
1.36%
HCT
68
1.2%
H6H
66
1.17%
F5H/CYP84A
65
1.15%
CAS
63
1.11%
CODM/T6ODM
58
1.02%
TAT
57
1.01%
COMT
55
0.97%
LAC
55
0.97%
SMT1/SMT2/SMT3
54
0.95%
CYP71
51
0.9%
TPS
48
0.85%
GES
46
0.81%
GS
45
0.8%
7DLH
45
0.8%
CSE
44
0.78%
NCS
43
0.76%
F3'5'H/CYP75A
43
0.76%
BBE
42
0.74%
IFR
41
0.72%
SGD
40
0.71%
16OMT
37
0.65%
ANR
35
0.62%
CYP90D1
35
0.62%
RAS
33
0.58%
SLS
30
0.53%
PMT
30
0.53%
IO
29
0.51%
CPD/CYP90A1
28
0.49%
PYKS
26
0.46%
LAMT
25
0.44%
CCR
22
0.39%
BR6OX1/CYP85A1
22
0.39%
PAL
21
0.37%
ISY
20
0.35%
MPO
20
0.35%
8HGO
19
0.34%
TYDC_DDC
18
0.32%
COR
17
0.3%
CYP80B1
17
0.3%
CYP719
16
0.28%
DFR
13
0.23%
ROT3/CYP90C1
13
0.23%
FPPS
12
0.21%
CNMT
11
0.19%
ANS/LDOX
11
0.19%
GGPPS
11
0.19%
6OMT_4OMT_SOMT
10
0.18%
HPPR
10
0.18%
HMGR
9
0.16%
CYP80F1
8
0.14%
SQS/FDFT1
8
0.14%
SQE
8
0.14%
AACT
8
0.14%
CCoAOMT
7
0.12%
TDC
6
0.11%
XMT_MXMT_DXMT
6
0.11%
CYP51G1
6
0.11%
DET2
6
0.11%
DXS
6
0.11%
CPR
5
0.09%
MCT/IspD
5
0.09%
CHS
4
0.07%
MVD
4
0.07%
ODC
3
0.05%
CHI
3
0.05%
SMO1/SMO2
3
0.05%
MVK
3
0.05%
DXR
3
0.05%
CMK/IspE
3
0.05%
HDR/IspH
3
0.05%
IDI
3
0.05%
FLS
2
0.04%
CPI1
2
0.04%
DWF5
2
0.04%
HMGS
2
0.04%
PMK
2
0.04%
ADC
1
0.02%
HYD1
1
0.02%
DWF1
1
0.02%
FK
1
0.02%
DWF7
1
0.02%
MDS/IspF
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 841 | 20 | UGT (357) | View species results |
| Alkaloid pathway | 560 | 25 | 7DLGT (170) | View species results |
| Phenylpropanoid pathway | 414 | 13 | POD (152) | View species results |
| Flavonoid pathway | 397 | 13 | UFGT (302) | View species results |
| Rosmarinic acid pathway | 154 | 7 | TAT (47) | View species results |
| Steroid pathway | 125 | 12 | CAS (60) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2077 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 416 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Cmolctg00060012290.1 | Flavonoid | PAL | high | pass | PAL__00005__sp_Q50EX7_PAL1_PETHY |
| Cmolctg01110110890.1 | Flavonoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Cmolctg03930229500.1 | Flavonoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Cmolctg03930229510.1 | Flavonoid | PAL | medium | pass | PAL__00004__sp_P45725_PAL3_ARATH |
| Cmolctg03930229520.1 | Flavonoid | PAL | high | pass | PAL__00005__sp_Q50EX7_PAL1_PETHY |
| Cmolctg03930229530.1 | Flavonoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Cmolctg08650308290.1 | Flavonoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Cmolctg00060012290.1 | Phenylpropanoid | PAL | high | pass | PAL__00005__sp_Q50EX7_PAL1_PETHY |
| Cmolctg01110110890.1 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Cmolctg03930229500.1 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Cmolctg03930229510.1 | Phenylpropanoid | PAL | medium | pass | PAL__00004__sp_P45725_PAL3_ARATH |
| Cmolctg03930229520.1 | Phenylpropanoid | PAL | high | pass | PAL__00005__sp_Q50EX7_PAL1_PETHY |
| Cmolctg03930229530.1 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Cmolctg08650308290.1 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Cmolctg00060012290.1 | Rosmarinic Acid | PAL | high | pass | PAL__00005__sp_Q50EX7_PAL1_PETHY |
| Cmolctg01110110890.1 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Cmolctg03930229500.1 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Cmolctg03930229510.1 | Rosmarinic Acid | PAL | medium | pass | PAL__00004__sp_P45725_PAL3_ARATH |
| Cmolctg03930229520.1 | Rosmarinic Acid | PAL | high | pass | PAL__00005__sp_Q50EX7_PAL1_PETHY |
| Cmolctg03930229530.1 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Cmolctg08650308290.1 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |