Castanea mollissima (castanea_mollissima)
Imported from atlas release summary for Castanea mollissima.
2636
Candidate Protein Records
2491
Pathway-Level Records
5659
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5659
Family-Level Calls
C4H
7.19%
UGT
6.93%
7DLGT
6.11%
UFGT
5.81%
BAHD
5.57%
C3'H/CYP98A
4.68%
CYP76
4.24%
POD
2.95%
Other Families
56.51%
More Families (97)
IFS
163
2.88%
4CL
150
2.65%
F3'H/CYP75B
120
2.12%
G8O/G8H
119
2.1%
F3H
117
2.07%
T3O
104
1.84%
DWF4/CYP90B1
94
1.66%
CAD
88
1.56%
NMT
87
1.54%
STR
85
1.5%
T16H
80
1.41%
FNS
79
1.4%
TRI/TRII
78
1.38%
BR6OX2/CYP85A2
77
1.36%
HCT
68
1.2%
H6H
66
1.17%
F5H/CYP84A
65
1.15%
CAS
63
1.11%
CODM/T6ODM
58
1.02%
TAT
57
1.01%
COMT
55
0.97%
LAC
55
0.97%
SMT1/SMT2/SMT3
54
0.95%
CYP71
51
0.9%
TPS
48
0.85%
GES
46
0.81%
GS
45
0.8%
7DLH
45
0.8%
CSE
44
0.78%
NCS
43
0.76%
F3'5'H/CYP75A
43
0.76%
BBE
42
0.74%
IFR
41
0.72%
SGD
40
0.71%
16OMT
37
0.65%
ANR
35
0.62%
CYP90D1
35
0.62%
RAS
33
0.58%
SLS
30
0.53%
PMT
30
0.53%
IO
29
0.51%
CPD/CYP90A1
28
0.49%
PYKS
26
0.46%
LAMT
25
0.44%
CCR
22
0.39%
BR6OX1/CYP85A1
22
0.39%
PAL
21
0.37%
ISY
20
0.35%
MPO
20
0.35%
8HGO
19
0.34%
TYDC_DDC
18
0.32%
COR
17
0.3%
CYP80B1
17
0.3%
CYP719
16
0.28%
DFR
13
0.23%
ROT3/CYP90C1
13
0.23%
FPPS
12
0.21%
CNMT
11
0.19%
ANS/LDOX
11
0.19%
GGPPS
11
0.19%
6OMT_4OMT_SOMT
10
0.18%
HPPR
10
0.18%
HMGR
9
0.16%
CYP80F1
8
0.14%
SQS/FDFT1
8
0.14%
SQE
8
0.14%
AACT
8
0.14%
CCoAOMT
7
0.12%
TDC
6
0.11%
XMT_MXMT_DXMT
6
0.11%
CYP51G1
6
0.11%
DET2
6
0.11%
DXS
6
0.11%
CPR
5
0.09%
MCT/IspD
5
0.09%
CHS
4
0.07%
MVD
4
0.07%
ODC
3
0.05%
CHI
3
0.05%
SMO1/SMO2
3
0.05%
MVK
3
0.05%
DXR
3
0.05%
CMK/IspE
3
0.05%
HDR/IspH
3
0.05%
IDI
3
0.05%
FLS
2
0.04%
CPI1
2
0.04%
DWF5
2
0.04%
HMGS
2
0.04%
PMK
2
0.04%
ADC
1
0.02%
HYD1
1
0.02%
DWF1
1
0.02%
FK
1
0.02%
DWF7
1
0.02%
MDS/IspF
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 841 | 20 | UGT (357) | View species results |
| Alkaloid pathway | 560 | 25 | 7DLGT (170) | View species results |
| Phenylpropanoid pathway | 414 | 13 | POD (152) | View species results |
| Flavonoid pathway | 397 | 13 | UFGT (302) | View species results |
| Rosmarinic acid pathway | 154 | 7 | TAT (47) | View species results |
| Steroid pathway | 125 | 12 | CAS (60) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2077 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 416 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cmolctg19100351140.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmolctg19160351310.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmolctg19420351830.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmolctg20770355370.1 | Rosmarinic Acid | C4H | medium | pass |
| Cmolctg20800355410.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmolctg20800355420.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmolctg21490356960.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmolctg21560357060.1 | Rosmarinic Acid | C4H | low | borderline |
| Cmolctg22610359590.1 | Rosmarinic Acid | C4H | medium | pass |
| Cmolctg00630075860.1 | Rosmarinic Acid | CPR | medium | pass |
| Cmolctg01970158020.1 | Rosmarinic Acid | CPR | medium | pass |
| Cmolctg02260170470.1 | Rosmarinic Acid | CPR | medium | pass |
| Cmolctg02590184110.1 | Rosmarinic Acid | CPR | medium | pass |
| Cmolctg20160353460.1 | Rosmarinic Acid | CPR | medium | pass |
| Cmolctg00110020540.1 | Rosmarinic Acid | HPPR | medium | pass |
| Cmolctg00110020550.1 | Rosmarinic Acid | HPPR | low | borderline |
| Cmolctg00110020560.1 | Rosmarinic Acid | HPPR | medium | pass |
| Cmolctg00570071070.1 | Rosmarinic Acid | HPPR | medium | pass |
| Cmolctg00570071080.1 | Rosmarinic Acid | HPPR | medium | pass |
| Cmolctg03510215810.1 | Rosmarinic Acid | HPPR | medium | pass |
| Cmolctg03510215820.1 | Rosmarinic Acid | HPPR | medium | pass |
| Cmolctg03510215830.1 | Rosmarinic Acid | HPPR | medium | pass |
| Cmolctg03510215840.1 | Rosmarinic Acid | HPPR | medium | pass |
| Cmolctg03510215850.1 | Rosmarinic Acid | HPPR | medium | pass |
| Cmolctg00060012290.1 | Rosmarinic Acid | PAL | high | pass |
| Cmolctg01110110890.1 | Rosmarinic Acid | PAL | high | pass |
| Cmolctg03930229500.1 | Rosmarinic Acid | PAL | high | pass |
| Cmolctg03930229510.1 | Rosmarinic Acid | PAL | medium | pass |
| Cmolctg03930229520.1 | Rosmarinic Acid | PAL | high | pass |
| Cmolctg03930229530.1 | Rosmarinic Acid | PAL | high | pass |
| Cmolctg08650308290.1 | Rosmarinic Acid | PAL | high | pass |
| Cmolctg00150027790.1 | Rosmarinic Acid | RAS | medium | pass |
| Cmolctg00220036760.1 | Rosmarinic Acid | RAS | medium | pass |
| Cmolctg00270043470.1 | Rosmarinic Acid | RAS | medium | pass |
| Cmolctg00680079740.1 | Rosmarinic Acid | RAS | medium | pass |
| Cmolctg00770086650.1 | Rosmarinic Acid | RAS | low | borderline |
| Cmolctg00840093280.1 | Rosmarinic Acid | RAS | medium | pass |
| Cmolctg01150113250.1 | Rosmarinic Acid | RAS | low | borderline |
| Cmolctg01220117210.1 | Rosmarinic Acid | RAS | low | borderline |
| Cmolctg01710143370.1 | Rosmarinic Acid | RAS | low | borderline |
| Cmolctg01770146950.1 | Rosmarinic Acid | RAS | low | borderline |
| Cmolctg02680187790.1 | Rosmarinic Acid | RAS | medium | pass |
| Cmolctg03160205200.1 | Rosmarinic Acid | RAS | medium | pass |
| Cmolctg03160205210.1 | Rosmarinic Acid | RAS | medium | pass |
| Cmolctg03400211840.1 | Rosmarinic Acid | RAS | low | borderline |
| Cmolctg03400211850.1 | Rosmarinic Acid | RAS | low | borderline |
| Cmolctg03400211860.1 | Rosmarinic Acid | RAS | medium | pass |
| Cmolctg03400211870.1 | Rosmarinic Acid | RAS | low | borderline |
| Cmolctg03500215370.1 | Rosmarinic Acid | RAS | low | borderline |
| Cmolctg03500215380.1 | Rosmarinic Acid | RAS | low | borderline |