Casuarina equisetifolia (casuarina_equisetifolia)
Imported from atlas release summary for Casuarina equisetifolia.
1816
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1816
Candidate Genes
C4H
6.56%
C3'H/CYP98A
6.0%
BAHD
4.51%
UGT
4.46%
POD
4.02%
CYP76
3.95%
7DLGT
3.9%
4CL
3.88%
Other Families
62.72%
More Families (97)
UFGT
168
3.75%
IFS
162
3.61%
T3O
144
3.21%
DWF4/CYP90B1
119
2.66%
F3H
112
2.5%
CAD
111
2.48%
F3'H/CYP75B
98
2.19%
TRI/TRII
77
1.72%
BR6OX2/CYP85A2
70
1.56%
GS
68
1.52%
CODM/T6ODM
68
1.52%
CAS
66
1.47%
NMT
63
1.41%
LAC
59
1.32%
H6H
56
1.25%
STR
55
1.23%
SMT1/SMT2/SMT3
49
1.09%
TPS
49
1.09%
GES
47
1.05%
T16H
47
1.05%
HCT
47
1.05%
CYP71
47
1.05%
COMT
45
1.0%
IFR
43
0.96%
IO
42
0.94%
CYP90D1
41
0.91%
FNS
38
0.85%
G8O/G8H
36
0.8%
CSE
36
0.8%
16OMT
35
0.78%
TAT
35
0.78%
SGD
34
0.76%
BR6OX1/CYP85A1
32
0.71%
ANR
30
0.67%
PYKS
26
0.58%
F5H/CYP84A
26
0.58%
7DLH
24
0.54%
8HGO
23
0.51%
SLS
23
0.51%
CCR
23
0.51%
NCS
22
0.49%
COR
22
0.49%
RAS
22
0.49%
PMT
20
0.45%
ROT3/CYP90C1
19
0.42%
DFR
18
0.4%
CPD/CYP90A1
17
0.38%
LAMT
16
0.36%
F3'5'H/CYP75A
16
0.36%
CYP80B1
14
0.31%
TYDC_DDC
13
0.29%
CPR
13
0.29%
CYP51G1
13
0.29%
CNMT
12
0.27%
PAL
12
0.27%
ISY
10
0.22%
CCoAOMT
10
0.22%
SQS/FDFT1
10
0.22%
GGPPS
10
0.22%
MPO
9
0.2%
BBE
8
0.18%
ANS/LDOX
8
0.18%
HPPR
8
0.18%
DXS
8
0.18%
FPPS
8
0.18%
AACT
8
0.18%
CHS
7
0.16%
TDC
6
0.13%
SQE
6
0.13%
6OMT_4OMT_SOMT
5
0.11%
HMGR
5
0.11%
MVD
5
0.11%
CYP719
4
0.09%
XMT_MXMT_DXMT
4
0.09%
DET2
4
0.09%
MVK
4
0.09%
PMK
4
0.09%
HMGS
4
0.09%
CHI
3
0.07%
HYD1
3
0.07%
CMK/IspE
3
0.07%
HDS/IspG
3
0.07%
CYP80F1
2
0.04%
FLS
2
0.04%
FK
2
0.04%
SMO1/SMO2
2
0.04%
DWF5
2
0.04%
MCT/IspD
2
0.04%
ADC
1
0.02%
ODC
1
0.02%
CPI1
1
0.02%
DWF1
1
0.02%
DWF7
1
0.02%
MDS/IspF
1
0.02%
IDI
1
0.02%
HDR/IspH
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 508 | 18 | UGT (187) | View species results |
| Phenylpropanoid pathway | 421 | 11 | POD (171) | View species results |
| Alkaloid pathway | 411 | 23 | 7DLGT (90) | View species results |
| Flavonoid pathway | 229 | 11 | UFGT (152) | View species results |
| Rosmarinic acid pathway | 139 | 7 | C4H (53) | View species results |
| Steroid pathway | 108 | 13 | CAS (50) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1736 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 271 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| casuarina_equisetifolia_CCG001048 | Alkaloid | NCS | low | borderline | NCS__00004__sp_Q4QTJ2_NCS1_PAPSO |
| casuarina_equisetifolia_CCG001049 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| casuarina_equisetifolia_CCG002167 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| casuarina_equisetifolia_CCG009122 | Alkaloid | NCS | low | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| casuarina_equisetifolia_CCG011329 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| casuarina_equisetifolia_CCG013068 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| casuarina_equisetifolia_CCG013070 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| casuarina_equisetifolia_CCG013320 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| casuarina_equisetifolia_CCG018985 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| casuarina_equisetifolia_CCG018986 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| casuarina_equisetifolia_CCG018987 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| casuarina_equisetifolia_CCG018988 | Alkaloid | NCS | medium | pass | NCS__00004__sp_Q4QTJ2_NCS1_PAPSO |
| casuarina_equisetifolia_CCG018989 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| casuarina_equisetifolia_CCG019066 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| casuarina_equisetifolia_CCG020412 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| casuarina_equisetifolia_CCG021874 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| casuarina_equisetifolia_CCG022657 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| casuarina_equisetifolia_CCG025761 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| casuarina_equisetifolia_CCG026084 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| casuarina_equisetifolia_CCG026559 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| casuarina_equisetifolia_CCG026563 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| casuarina_equisetifolia_CCG026565 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |