PlantSME Plant secondary metabolism enzyme database

Catagonium nitens (catagonium_nitens)

Imported from atlas release summary for Catagonium nitens.

630
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 25.87% Terpenoid pathway 23.02% Alkaloid pathway 20.32% Flavonoid pathway 12.7% Rosmarinic acid pathway 10.63% Steroid pathway 7.46%
Family Distribution
C4H 7.3% C3'H/CYP98A 6.08% POD 5.6% BAHD 5.41% 4CL 4.44% CYP76 4.26% NMT 3.59% IFS 3.59%
Other Families 59.73%
More Families (95)
PAL 45 2.74% BR6OX2/CYP85A2 45 2.74% T3O 44 2.68% F3H 41 2.49% IFR 39 2.37% STR 38 2.31% F3'H/CYP75B 38 2.31% DWF4/CYP90B1 35 2.13% GS 29 1.76% PYKS 29 1.76% CODM/T6ODM 26 1.58% IO 25 1.52% UGT 23 1.4% UFGT 21 1.28% 7DLGT 20 1.22% SMT1/SMT2/SMT3 20 1.22% CAD 19 1.16% CHS 17 1.03% CYP71 17 1.03% 7DLH 16 0.97% H6H 16 0.97% CAS 15 0.91% SLS 14 0.85% COMT 14 0.85% CYP90D1 14 0.85% F3'5'H/CYP75A 13 0.79% TRI/TRII 12 0.73% CPD/CYP90A1 12 0.73% G8O/G8H 11 0.67% FNS 11 0.67% NCS 10 0.61% HCT 10 0.61% LAC 10 0.61% CSE 10 0.61% 8HGO 9 0.55% T16H 9 0.55% CYP80B1 9 0.55% RAS 8 0.49% DWF5 8 0.49% SGD 7 0.43% LAMT 7 0.43% 16OMT 7 0.43% CNMT 7 0.43% SMO1/SMO2 7 0.43% ANR 6 0.36% CCR 6 0.36% F5H/CYP84A 6 0.36% CPR 6 0.36% ROT3/CYP90C1 6 0.36% SQS/FDFT1 6 0.36% COR 5 0.3% TDC 5 0.3% MPO 5 0.3% BBE 5 0.3% GGPPS 5 0.3% AACT 5 0.3% DFR 4 0.24% TAT 4 0.24% DET2 4 0.24% PMT 3 0.18% TYDC_DDC 3 0.18% CHI 3 0.18% FLS 3 0.18% CYP51G1 3 0.18% BR6OX1/CYP85A1 3 0.18% MVD 3 0.18% MVK 3 0.18% 6OMT_4OMT_SOMT 2 0.12% ADC 2 0.12% CYP719 2 0.12% XMT_MXMT_DXMT 2 0.12% CCoAOMT 2 0.12% FK 2 0.12% SQE 2 0.12% FPPS 2 0.12% CMK/IspE 2 0.12% MDS/IspF 2 0.12% HDR/IspH 2 0.12% TPS 2 0.12% PMK 2 0.12% MCT/IspD 2 0.12% HDS/IspG 2 0.12% ISY 1 0.06% CYP80F1 1 0.06% GES 1 0.06% HPPR 1 0.06% DWF7 1 0.06% DWF1 1 0.06% CPI1 1 0.06% HYD1 1 0.06% IDI 1 0.06% DXR 1 0.06% HMGS 1 0.06% DXS 1 0.06% HMGR 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 163 11 POD (86) View species results
Terpenoid pathway 145 19 BAHD (63) View species results
Alkaloid pathway 128 17 NMT (27) View species results
Flavonoid pathway 80 10 UFGT (18) View species results
Rosmarinic acid pathway 67 7 C4H (27) View species results
Steroid pathway 47 13 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 672 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 107 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Gene Pathway Family Confidence Status Best Target
Cnit2002140041530 Steroid CAS medium pass CAS__00012__sp_Q9FN48_CAS_ARATH
Cnit2271100062420 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Cnit2286070067350 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Cnit2286110067430 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Cnit2378660073180 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Cnit2386370077600 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
Cnit2392610083400 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Cnit2438710102220 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Cnit2442230105890 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Cnit2495200120110 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
Cnit2530410133120 Steroid CAS medium pass CAS__00012__sp_Q9FN48_CAS_ARATH
Cnit2580450187860 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Cnit2580450187870 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
Cnit2597950210520 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
Cnit2602410217740 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL