Catagonium nitens (catagonium_nitens)
Imported from atlas release summary for Catagonium nitens.
630
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
630
Candidate Genes
C4H
7.3%
C3'H/CYP98A
6.08%
POD
5.6%
BAHD
5.41%
4CL
4.44%
CYP76
4.26%
NMT
3.59%
IFS
3.59%
Other Families
59.73%
More Families (95)
PAL
45
2.74%
BR6OX2/CYP85A2
45
2.74%
T3O
44
2.68%
F3H
41
2.49%
IFR
39
2.37%
STR
38
2.31%
F3'H/CYP75B
38
2.31%
DWF4/CYP90B1
35
2.13%
GS
29
1.76%
PYKS
29
1.76%
CODM/T6ODM
26
1.58%
IO
25
1.52%
UGT
23
1.4%
UFGT
21
1.28%
7DLGT
20
1.22%
SMT1/SMT2/SMT3
20
1.22%
CAD
19
1.16%
CHS
17
1.03%
CYP71
17
1.03%
7DLH
16
0.97%
H6H
16
0.97%
CAS
15
0.91%
SLS
14
0.85%
COMT
14
0.85%
CYP90D1
14
0.85%
F3'5'H/CYP75A
13
0.79%
TRI/TRII
12
0.73%
CPD/CYP90A1
12
0.73%
G8O/G8H
11
0.67%
FNS
11
0.67%
NCS
10
0.61%
HCT
10
0.61%
LAC
10
0.61%
CSE
10
0.61%
8HGO
9
0.55%
T16H
9
0.55%
CYP80B1
9
0.55%
RAS
8
0.49%
DWF5
8
0.49%
SGD
7
0.43%
LAMT
7
0.43%
16OMT
7
0.43%
CNMT
7
0.43%
SMO1/SMO2
7
0.43%
ANR
6
0.36%
CCR
6
0.36%
F5H/CYP84A
6
0.36%
CPR
6
0.36%
ROT3/CYP90C1
6
0.36%
SQS/FDFT1
6
0.36%
COR
5
0.3%
TDC
5
0.3%
MPO
5
0.3%
BBE
5
0.3%
GGPPS
5
0.3%
AACT
5
0.3%
DFR
4
0.24%
TAT
4
0.24%
DET2
4
0.24%
PMT
3
0.18%
TYDC_DDC
3
0.18%
CHI
3
0.18%
FLS
3
0.18%
CYP51G1
3
0.18%
BR6OX1/CYP85A1
3
0.18%
MVD
3
0.18%
MVK
3
0.18%
6OMT_4OMT_SOMT
2
0.12%
ADC
2
0.12%
CYP719
2
0.12%
XMT_MXMT_DXMT
2
0.12%
CCoAOMT
2
0.12%
FK
2
0.12%
SQE
2
0.12%
FPPS
2
0.12%
CMK/IspE
2
0.12%
MDS/IspF
2
0.12%
HDR/IspH
2
0.12%
TPS
2
0.12%
PMK
2
0.12%
MCT/IspD
2
0.12%
HDS/IspG
2
0.12%
ISY
1
0.06%
CYP80F1
1
0.06%
GES
1
0.06%
HPPR
1
0.06%
DWF7
1
0.06%
DWF1
1
0.06%
CPI1
1
0.06%
HYD1
1
0.06%
IDI
1
0.06%
DXR
1
0.06%
HMGS
1
0.06%
DXS
1
0.06%
HMGR
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 163 | 11 | POD (86) | View species results |
| Terpenoid pathway | 145 | 19 | BAHD (63) | View species results |
| Alkaloid pathway | 128 | 17 | NMT (27) | View species results |
| Flavonoid pathway | 80 | 10 | UFGT (18) | View species results |
| Rosmarinic acid pathway | 67 | 7 | C4H (27) | View species results |
| Steroid pathway | 47 | 13 | CAS (14) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 672 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 107 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Cnit2624950245730 | Alkaloid | LAMT | medium | borderline | LAMT__00001__sp_B2KPR3_LAMT_CATRO |
| Cnit1999730038400 | Alkaloid | MPO | high | pass | MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC |
| Cnit2438960102510 | Alkaloid | MPO | medium | pass | MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC |
| Cnit2438960102520 | Alkaloid | MPO | medium | pass | MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC |
| Cnit2590570200690 | Alkaloid | MPO | high | pass | MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC |
| Cnit2604690220850 | Alkaloid | MPO | medium | pass | MPO__00001__sp_A0A1S3XSG2_DAO1_TOBAC |
| Cnit1722720013520 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| Cnit2358150069700 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| Cnit2387190078840 | Alkaloid | NCS | medium | pass | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| Cnit2504870125500 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| Cnit2505160125850 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| Cnit2507870127640 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cnit2558360162340 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cnit2580160187120 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cnit2615020238270 | Alkaloid | NCS | low | borderline | NCS__00003__sp_Q4QTJ1_NCS2_PAPSO |
| Cnit2625610246060 | Alkaloid | NCS | medium | borderline | NCS__00001__sp_A2A1A0_NCS1_COPJA |
| Cnit1717580011140 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Cnit1722240013080 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Cnit1729880019280 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Cnit1978840030150 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Cnit1979130031180 | Alkaloid | NMT | low | borderline | NMT__00019__sp_O22781_SUVH2_ARATH |
| Cnit1994680032990 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Cnit1996880035440 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Cnit2003310042830 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| Cnit2005920045000 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Cnit2010220046800 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Cnit2010220046820 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Cnit2010980047220 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Cnit2027080050370 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Cnit2029620051200 | Alkaloid | NMT | medium | borderline | NMT__00015__sp_C8YTM5_PEAM2_WHEAT |
| Cnit2035100051670 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Cnit2358080069470 | Alkaloid | NMT | medium | pass | NMT__00023__sp_O82210_ANM12_ARATH |
| Cnit2378530073160 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Cnit2386280077460 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Cnit2388570080920 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Cnit2414410093800 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Cnit2427260101200 | Alkaloid | NMT | low | borderline | NMT__00020__sp_O23372_ATXR3_ARATH |
| Cnit2443280107800 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Cnit2444490108530 | Alkaloid | NMT | low | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Cnit2487760115120 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| Cnit2489330117690 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Cnit2500880121440 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Cnit2504050124660 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Cnit2523210129110 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Cnit2529450132040 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| Cnit2531150133840 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Cnit2532600135140 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Cnit2533290136860 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Cnit2533800138540 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Cnit2537830143830 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |