Catagonium nitens (catagonium_nitens)
Imported from atlas release summary for Catagonium nitens.
630
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
630
Candidate Genes
C4H
7.3%
C3'H/CYP98A
6.08%
POD
5.6%
BAHD
5.41%
4CL
4.44%
CYP76
4.26%
NMT
3.59%
IFS
3.59%
Other Families
59.73%
More Families (95)
PAL
45
2.74%
BR6OX2/CYP85A2
45
2.74%
T3O
44
2.68%
F3H
41
2.49%
IFR
39
2.37%
STR
38
2.31%
F3'H/CYP75B
38
2.31%
DWF4/CYP90B1
35
2.13%
GS
29
1.76%
PYKS
29
1.76%
CODM/T6ODM
26
1.58%
IO
25
1.52%
UGT
23
1.4%
UFGT
21
1.28%
7DLGT
20
1.22%
SMT1/SMT2/SMT3
20
1.22%
CAD
19
1.16%
CHS
17
1.03%
CYP71
17
1.03%
7DLH
16
0.97%
H6H
16
0.97%
CAS
15
0.91%
SLS
14
0.85%
COMT
14
0.85%
CYP90D1
14
0.85%
F3'5'H/CYP75A
13
0.79%
TRI/TRII
12
0.73%
CPD/CYP90A1
12
0.73%
G8O/G8H
11
0.67%
FNS
11
0.67%
NCS
10
0.61%
HCT
10
0.61%
LAC
10
0.61%
CSE
10
0.61%
8HGO
9
0.55%
T16H
9
0.55%
CYP80B1
9
0.55%
RAS
8
0.49%
DWF5
8
0.49%
SGD
7
0.43%
LAMT
7
0.43%
16OMT
7
0.43%
CNMT
7
0.43%
SMO1/SMO2
7
0.43%
ANR
6
0.36%
CCR
6
0.36%
F5H/CYP84A
6
0.36%
CPR
6
0.36%
ROT3/CYP90C1
6
0.36%
SQS/FDFT1
6
0.36%
COR
5
0.3%
TDC
5
0.3%
MPO
5
0.3%
BBE
5
0.3%
GGPPS
5
0.3%
AACT
5
0.3%
DFR
4
0.24%
TAT
4
0.24%
DET2
4
0.24%
PMT
3
0.18%
TYDC_DDC
3
0.18%
CHI
3
0.18%
FLS
3
0.18%
CYP51G1
3
0.18%
BR6OX1/CYP85A1
3
0.18%
MVD
3
0.18%
MVK
3
0.18%
6OMT_4OMT_SOMT
2
0.12%
ADC
2
0.12%
CYP719
2
0.12%
XMT_MXMT_DXMT
2
0.12%
CCoAOMT
2
0.12%
FK
2
0.12%
SQE
2
0.12%
FPPS
2
0.12%
CMK/IspE
2
0.12%
MDS/IspF
2
0.12%
HDR/IspH
2
0.12%
TPS
2
0.12%
PMK
2
0.12%
MCT/IspD
2
0.12%
HDS/IspG
2
0.12%
ISY
1
0.06%
CYP80F1
1
0.06%
GES
1
0.06%
HPPR
1
0.06%
DWF7
1
0.06%
DWF1
1
0.06%
CPI1
1
0.06%
HYD1
1
0.06%
IDI
1
0.06%
DXR
1
0.06%
HMGS
1
0.06%
DXS
1
0.06%
HMGR
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 163 | 11 | POD (86) | View species results |
| Terpenoid pathway | 145 | 19 | BAHD (63) | View species results |
| Alkaloid pathway | 128 | 17 | NMT (27) | View species results |
| Flavonoid pathway | 80 | 10 | UFGT (18) | View species results |
| Rosmarinic acid pathway | 67 | 7 | C4H (27) | View species results |
| Steroid pathway | 47 | 13 | CAS (14) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 672 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 107 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cnit2540270149320 | Alkaloid | NMT | medium | borderline |
| Cnit2540510150300 | Alkaloid | NMT | medium | pass |
| Cnit2544960152800 | Alkaloid | NMT | medium | pass |
| Cnit2547610156180 | Alkaloid | NMT | low | borderline |
| Cnit2555330158310 | Alkaloid | NMT | low | borderline |
| Cnit2564950170060 | Alkaloid | NMT | low | borderline |
| Cnit2565490170480 | Alkaloid | NMT | low | borderline |
| Cnit2566240171570 | Alkaloid | NMT | medium | pass |
| Cnit2566560172030 | Alkaloid | NMT | medium | pass |
| Cnit2574580175620 | Alkaloid | NMT | medium | borderline |
| Cnit2575490177430 | Alkaloid | NMT | medium | borderline |
| Cnit2576400178810 | Alkaloid | NMT | low | borderline |
| Cnit2577230180750 | Alkaloid | NMT | low | borderline |
| Cnit2577420181520 | Alkaloid | NMT | low | borderline |
| Cnit2578600183280 | Alkaloid | NMT | medium | pass |
| Cnit2580180187180 | Alkaloid | NMT | medium | borderline |
| Cnit2581590188840 | Alkaloid | NMT | low | borderline |
| Cnit2596160206020 | Alkaloid | NMT | medium | pass |
| Cnit2597350209110 | Alkaloid | NMT | medium | pass |
| Cnit2603330219470 | Alkaloid | NMT | medium | pass |
| Cnit2607980226020 | Alkaloid | NMT | medium | borderline |
| Cnit2615050238370 | Alkaloid | NMT | medium | borderline |
| Cnit2618760242990 | Alkaloid | NMT | medium | pass |
| Cnit2618950243150 | Alkaloid | NMT | medium | pass |
| Cnit2620780244360 | Alkaloid | NMT | low | borderline |
| Cnit1661900007040 | Alkaloid | PMT | medium | borderline |
| Cnit1977970029050 | Alkaloid | PMT | medium | pass |
| Cnit2272320063030 | Alkaloid | PMT | medium | pass |
| Cnit1729050018440 | Alkaloid | PYKS | low | borderline |
| Cnit1729680019090 | Alkaloid | PYKS | high | pass |
| Cnit1729680019100 | Alkaloid | PYKS | medium | pass |
| Cnit1998870038000 | Alkaloid | PYKS | low | borderline |
| Cnit2054130053180 | Alkaloid | PYKS | medium | pass |
| Cnit2054130053190 | Alkaloid | PYKS | high | pass |
| Cnit2167830056190 | Alkaloid | PYKS | high | pass |
| Cnit2273900063610 | Alkaloid | PYKS | low | borderline |
| Cnit2371810071540 | Alkaloid | PYKS | low | borderline |
| Cnit2372630071780 | Alkaloid | PYKS | low | borderline |
| Cnit2399380087090 | Alkaloid | PYKS | low | borderline |
| Cnit2439500103080 | Alkaloid | PYKS | high | pass |
| Cnit2442500106290 | Alkaloid | PYKS | low | borderline |
| Cnit2443930107940 | Alkaloid | PYKS | low | borderline |
| Cnit2489250117320 | Alkaloid | PYKS | high | pass |
| Cnit2528080131160 | Alkaloid | PYKS | low | borderline |
| Cnit2535900141160 | Alkaloid | PYKS | high | pass |
| Cnit2538070144290 | Alkaloid | PYKS | high | pass |
| Cnit2545360153200 | Alkaloid | PYKS | high | pass |
| Cnit2562600167370 | Alkaloid | PYKS | low | borderline |
| Cnit2577840182050 | Alkaloid | PYKS | high | pass |
| Cnit2580570188230 | Alkaloid | PYKS | high | pass |