Catagonium nitens (catagonium_nitens)
Imported from atlas release summary for Catagonium nitens.
865
Candidate Protein Records
630
Pathway-Level Records
1644
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1644
Family-Level Calls
C4H
7.3%
C3'H/CYP98A
6.08%
POD
5.6%
BAHD
5.41%
4CL
4.44%
CYP76
4.26%
NMT
3.59%
IFS
3.59%
Other Families
59.73%
More Families (95)
PAL
45
2.74%
BR6OX2/CYP85A2
45
2.74%
T3O
44
2.68%
F3H
41
2.49%
IFR
39
2.37%
STR
38
2.31%
F3'H/CYP75B
38
2.31%
DWF4/CYP90B1
35
2.13%
GS
29
1.76%
PYKS
29
1.76%
CODM/T6ODM
26
1.58%
IO
25
1.52%
UGT
23
1.4%
UFGT
21
1.28%
7DLGT
20
1.22%
SMT1/SMT2/SMT3
20
1.22%
CAD
19
1.16%
CHS
17
1.03%
CYP71
17
1.03%
7DLH
16
0.97%
H6H
16
0.97%
CAS
15
0.91%
SLS
14
0.85%
COMT
14
0.85%
CYP90D1
14
0.85%
F3'5'H/CYP75A
13
0.79%
TRI/TRII
12
0.73%
CPD/CYP90A1
12
0.73%
G8O/G8H
11
0.67%
FNS
11
0.67%
NCS
10
0.61%
HCT
10
0.61%
LAC
10
0.61%
CSE
10
0.61%
8HGO
9
0.55%
T16H
9
0.55%
CYP80B1
9
0.55%
RAS
8
0.49%
DWF5
8
0.49%
SGD
7
0.43%
LAMT
7
0.43%
16OMT
7
0.43%
CNMT
7
0.43%
SMO1/SMO2
7
0.43%
ANR
6
0.36%
CCR
6
0.36%
F5H/CYP84A
6
0.36%
CPR
6
0.36%
ROT3/CYP90C1
6
0.36%
SQS/FDFT1
6
0.36%
COR
5
0.3%
TDC
5
0.3%
MPO
5
0.3%
BBE
5
0.3%
GGPPS
5
0.3%
AACT
5
0.3%
DFR
4
0.24%
TAT
4
0.24%
DET2
4
0.24%
PMT
3
0.18%
TYDC_DDC
3
0.18%
CHI
3
0.18%
FLS
3
0.18%
CYP51G1
3
0.18%
BR6OX1/CYP85A1
3
0.18%
MVD
3
0.18%
MVK
3
0.18%
6OMT_4OMT_SOMT
2
0.12%
ADC
2
0.12%
CYP719
2
0.12%
XMT_MXMT_DXMT
2
0.12%
CCoAOMT
2
0.12%
FK
2
0.12%
SQE
2
0.12%
FPPS
2
0.12%
CMK/IspE
2
0.12%
MDS/IspF
2
0.12%
HDR/IspH
2
0.12%
TPS
2
0.12%
PMK
2
0.12%
MCT/IspD
2
0.12%
HDS/IspG
2
0.12%
ISY
1
0.06%
CYP80F1
1
0.06%
GES
1
0.06%
HPPR
1
0.06%
DWF7
1
0.06%
DWF1
1
0.06%
CPI1
1
0.06%
HYD1
1
0.06%
IDI
1
0.06%
DXR
1
0.06%
HMGS
1
0.06%
DXS
1
0.06%
HMGR
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 163 | 11 | POD (86) | View species results |
| Terpenoid pathway | 145 | 19 | BAHD (63) | View species results |
| Alkaloid pathway | 128 | 17 | NMT (27) | View species results |
| Flavonoid pathway | 80 | 10 | UFGT (18) | View species results |
| Rosmarinic acid pathway | 67 | 7 | C4H (27) | View species results |
| Steroid pathway | 47 | 13 | CAS (14) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 672 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 107 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cnit2532340134460 | Alkaloid | T3O | medium | borderline |
| Cnit2533090136440 | Alkaloid | T3O | medium | borderline |
| Cnit2533970139030 | Alkaloid | T3O | medium | borderline |
| Cnit2536000141380 | Alkaloid | T3O | medium | pass |
| Cnit2537380143330 | Alkaloid | T3O | medium | pass |
| Cnit2537750143700 | Alkaloid | T3O | medium | borderline |
| Cnit2541970151900 | Alkaloid | T3O | low | borderline |
| Cnit2546580154990 | Alkaloid | T3O | low | borderline |
| Cnit2557020160150 | Alkaloid | T3O | medium | borderline |
| Cnit2558640162980 | Alkaloid | T3O | medium | pass |
| Cnit2559350164490 | Alkaloid | T3O | medium | borderline |
| Cnit2566400171810 | Alkaloid | T3O | medium | borderline |
| Cnit2576240178570 | Alkaloid | T3O | medium | borderline |
| Cnit2580290187540 | Alkaloid | T3O | medium | pass |
| Cnit2580290187550 | Alkaloid | T3O | medium | pass |
| Cnit2591290202210 | Alkaloid | T3O | medium | borderline |
| Cnit2597770210070 | Alkaloid | T3O | medium | pass |
| Cnit2610980231980 | Alkaloid | T3O | low | borderline |
| Cnit2614390237450 | Alkaloid | T3O | medium | borderline |
| Cnit1996860035380 | Alkaloid | TDC | medium | pass |
| Cnit2279580065970 | Alkaloid | TDC | medium | borderline |
| Cnit2508340127910 | Alkaloid | TDC | low | borderline |
| Cnit2516090128820 | Alkaloid | TDC | low | borderline |
| Cnit2565900171190 | Alkaloid | TDC | low | borderline |
| Cnit1726610016740 | Alkaloid | TRI/TRII | low | borderline |
| Cnit2417060098740 | Alkaloid | TRI/TRII | medium | pass |
| Cnit2442850107100 | Alkaloid | TRI/TRII | medium | pass |
| Cnit2513390128790 | Alkaloid | TRI/TRII | medium | pass |
| Cnit2532630135230 | Alkaloid | TRI/TRII | medium | pass |
| Cnit2542140151970 | Alkaloid | TRI/TRII | medium | pass |
| Cnit2558120161930 | Alkaloid | TRI/TRII | medium | pass |
| Cnit2582620190740 | Alkaloid | TRI/TRII | medium | pass |
| Cnit2587690196430 | Alkaloid | TRI/TRII | low | borderline |
| Cnit2587690196480 | Alkaloid | TRI/TRII | low | borderline |
| Cnit2598450212340 | Alkaloid | TRI/TRII | medium | pass |
| Cnit2614830238160 | Alkaloid | TRI/TRII | low | borderline |
| Cnit2279580065960 | Alkaloid | TYDC_DDC | medium | borderline |
| Cnit2555670159120 | Alkaloid | TYDC_DDC | medium | borderline |
| Cnit2557350160930 | Alkaloid | TYDC_DDC | medium | borderline |
| Cnit2508150127830 | Alkaloid | XMT_MXMT_DXMT | medium | borderline |
| Cnit2614380237420 | Alkaloid | XMT_MXMT_DXMT | low | borderline |