Chamaecrista fasciculata (chamaecrista_fasciculata)
Imported from atlas release summary for Chamaecrista fasciculata.
1382
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1382
Candidate Genes
C4H
6.22%
C3'H/CYP98A
5.47%
UGT
4.9%
BAHD
4.77%
7DLGT
4.55%
UFGT
4.36%
IFS
3.66%
CYP76
3.63%
Other Families
62.44%
More Families (95)
T3O
107
2.88%
4CL
105
2.83%
F3H
104
2.8%
POD
102
2.75%
DWF4/CYP90B1
74
1.99%
F3'H/CYP75B
70
1.88%
BR6OX2/CYP85A2
70
1.88%
NMT
67
1.8%
PYKS
66
1.78%
STR
64
1.72%
H6H
63
1.7%
CYP71
63
1.7%
CAD
56
1.51%
CODM/T6ODM
55
1.48%
COMT
52
1.4%
TRI/TRII
50
1.35%
LAC
50
1.35%
SMT1/SMT2/SMT3
49
1.32%
CAS
49
1.32%
CSE
44
1.18%
T16H
36
0.97%
CHS
36
0.97%
CYP90D1
36
0.97%
16OMT
34
0.92%
G8O/G8H
32
0.86%
F5H/CYP84A
32
0.86%
TPS
32
0.86%
GS
31
0.83%
GES
30
0.81%
SGD
30
0.81%
F3'5'H/CYP75A
28
0.75%
IFR
27
0.73%
LAMT
26
0.7%
IO
25
0.67%
RAS
24
0.65%
7DLH
23
0.62%
FNS
23
0.62%
TAT
21
0.57%
HCT
20
0.54%
PMT
19
0.51%
ANS/LDOX
19
0.51%
BR6OX1/CYP85A1
19
0.51%
PAL
18
0.48%
CCR
18
0.48%
NCS
17
0.46%
SLS
17
0.46%
CYP51G1
17
0.46%
ANR
16
0.43%
8HGO
14
0.38%
CPD/CYP90A1
14
0.38%
DFR
13
0.35%
BBE
12
0.32%
ISY
11
0.3%
CNMT
10
0.27%
COR
10
0.27%
ROT3/CYP90C1
10
0.27%
GGPPS
10
0.27%
CYP719
9
0.24%
CPR
9
0.24%
SQS/FDFT1
9
0.24%
TDC
7
0.19%
CYP80B1
7
0.19%
CHI
7
0.19%
MPO
6
0.16%
DET2
6
0.16%
MVK
6
0.16%
SMO1/SMO2
5
0.13%
HMGR
5
0.13%
FPPS
5
0.13%
MCT/IspD
5
0.13%
AACT
5
0.13%
MVD
5
0.13%
TYDC_DDC
4
0.11%
6OMT_4OMT_SOMT
4
0.11%
CCoAOMT
4
0.11%
DXS
4
0.11%
XMT_MXMT_DXMT
3
0.08%
DWF1
3
0.08%
SQE
3
0.08%
MDS/IspF
3
0.08%
ADC
2
0.05%
HPPR
2
0.05%
CPI1
2
0.05%
FK
2
0.05%
GPPS
2
0.05%
PMK
2
0.05%
HMGS
2
0.05%
DXR
2
0.05%
HDS/IspG
2
0.05%
HDR/IspH
2
0.05%
DWF5
1
0.03%
DWF7
1
0.03%
HYD1
1
0.03%
CMK/IspE
1
0.03%
IDI
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 390 | 19 | UGT (148) | View species results |
| Alkaloid pathway | 321 | 19 | 7DLGT (70) | View species results |
| Phenylpropanoid pathway | 264 | 11 | POD (96) | View species results |
| Flavonoid pathway | 229 | 13 | UFGT (143) | View species results |
| Rosmarinic acid pathway | 99 | 7 | C4H (46) | View species results |
| Steroid pathway | 79 | 12 | CAS (36) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1394 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 221 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Cfasscaffold1778_cov1990070330 | Terpenoid | BAHD | medium | pass | BAHD__00014__sp_B9RK42_GPC1_RICCO |
| Cfasscaffold1778_cov1990070430 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Cfasscaffold1793_cov2240071910 | Terpenoid | BAHD | medium | pass | BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN |
| Cfasscaffold1793_cov2240071920 | Terpenoid | BAHD | medium | pass | BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN |
| Cfasscaffold1809_cov1860072520 | Terpenoid | BAHD | medium | pass | BAHD__00089__sp_Q9SB58_ZDH19_ARATH |
| Cfasscaffold1822_cov1590072970 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Cfasscaffold1837_cov2200074010 | Terpenoid | BAHD | medium | pass | BAHD__00041__sp_Q4VCM1_LCAT2_ARATH |
| Cfasscaffold1863_cov1930075630 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Cfasscaffold1878_cov2050076610 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| Cfasscaffold196_cov2150082130 | Terpenoid | BAHD | low | borderline | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| Cfasscaffold197_cov1920082650 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| Cfasscaffold1_cov2170083980 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Cfasscaffold2135_cov1890092250 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Cfasscaffold2218_cov2010096960 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| Cfasscaffold2254_cov2090099680 | Terpenoid | BAHD | medium | pass | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| Cfasscaffold22635_cov1940099870 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Cfasscaffold2302_cov2220101660 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Cfasscaffold2421_cov2250107210 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Cfasscaffold2421_cov2250107220 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Cfasscaffold2421_cov2250107750 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| Cfasscaffold2441_cov2230108420 | Terpenoid | BAHD | low | borderline | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| Cfasscaffold2450_cov2150108660 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Cfasscaffold2450_cov2150108670 | Terpenoid | BAHD | low | borderline | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Cfasscaffold2509_cov2080110710 | Terpenoid | BAHD | medium | pass | BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC |
| Cfasscaffold2520_cov1880111650 | Terpenoid | BAHD | low | borderline | BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF |
| Cfasscaffold2566_cov1840113360 | Terpenoid | BAHD | medium | pass | BAHD__00071__sp_Q9CAY3_GPAT5_ARATH |
| Cfasscaffold2647_cov2070118760 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Cfasscaffold2647_cov2070118780 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Cfasscaffold2803_cov2010124200 | Terpenoid | BAHD | low | borderline | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| Cfasscaffold2845_cov2200125640 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| Cfasscaffold3047_cov2190133090 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Cfasscaffold3067_cov2100133620 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Cfasscaffold3067_cov2100133740 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Cfasscaffold3067_cov2100133750 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Cfasscaffold3130_cov1720135480 | Terpenoid | BAHD | medium | pass | BAHD__00048__sp_Q5M757_ZDH15_ARATH |
| Cfasscaffold3142_cov2030136090 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Cfasscaffold3170_cov2150137790 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Cfasscaffold3429_cov2030146270 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Cfasscaffold345_cov2200147530 | Terpenoid | BAHD | low | borderline | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Cfasscaffold3514_cov2070149590 | Terpenoid | BAHD | medium | pass | BAHD__00094__sp_Q9SYC8_LPAT3_ARATH |
| Cfasscaffold3554_cov1970150440 | Terpenoid | BAHD | medium | pass | BAHD__00085__sp_Q9M1K5_ZDH13_ARATH |
| Cfasscaffold3690_cov2120154240 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Cfasscaffold3690_cov2120154250 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Cfasscaffold3690_cov2120154260 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Cfasscaffold3707_cov2140154950 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| Cfasscaffold3790_cov2020157450 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Cfasscaffold4100_cov2100166790 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| Cfasscaffold4210_cov2190170560 | Terpenoid | BAHD | medium | pass | BAHD__00001__sp_A0A068BGA5_AT1_ACTDE |
| Cfasscaffold4329_cov1860172240 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Cfasscaffold4329_cov1860172250 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |