Chamaecrista fasciculata (chamaecrista_fasciculata)
Imported from atlas release summary for Chamaecrista fasciculata.
1753
Candidate Protein Records
1382
Pathway-Level Records
3714
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3714
Family-Level Calls
C4H
6.22%
C3'H/CYP98A
5.47%
UGT
4.9%
BAHD
4.77%
7DLGT
4.55%
UFGT
4.36%
IFS
3.66%
CYP76
3.63%
Other Families
62.44%
More Families (95)
T3O
107
2.88%
4CL
105
2.83%
F3H
104
2.8%
POD
102
2.75%
DWF4/CYP90B1
74
1.99%
F3'H/CYP75B
70
1.88%
BR6OX2/CYP85A2
70
1.88%
NMT
67
1.8%
PYKS
66
1.78%
STR
64
1.72%
H6H
63
1.7%
CYP71
63
1.7%
CAD
56
1.51%
CODM/T6ODM
55
1.48%
COMT
52
1.4%
TRI/TRII
50
1.35%
LAC
50
1.35%
SMT1/SMT2/SMT3
49
1.32%
CAS
49
1.32%
CSE
44
1.18%
T16H
36
0.97%
CHS
36
0.97%
CYP90D1
36
0.97%
16OMT
34
0.92%
G8O/G8H
32
0.86%
F5H/CYP84A
32
0.86%
TPS
32
0.86%
GS
31
0.83%
GES
30
0.81%
SGD
30
0.81%
F3'5'H/CYP75A
28
0.75%
IFR
27
0.73%
LAMT
26
0.7%
IO
25
0.67%
RAS
24
0.65%
7DLH
23
0.62%
FNS
23
0.62%
TAT
21
0.57%
HCT
20
0.54%
PMT
19
0.51%
ANS/LDOX
19
0.51%
BR6OX1/CYP85A1
19
0.51%
PAL
18
0.48%
CCR
18
0.48%
NCS
17
0.46%
SLS
17
0.46%
CYP51G1
17
0.46%
ANR
16
0.43%
8HGO
14
0.38%
CPD/CYP90A1
14
0.38%
DFR
13
0.35%
BBE
12
0.32%
ISY
11
0.3%
CNMT
10
0.27%
COR
10
0.27%
ROT3/CYP90C1
10
0.27%
GGPPS
10
0.27%
CYP719
9
0.24%
CPR
9
0.24%
SQS/FDFT1
9
0.24%
TDC
7
0.19%
CYP80B1
7
0.19%
CHI
7
0.19%
MPO
6
0.16%
DET2
6
0.16%
MVK
6
0.16%
SMO1/SMO2
5
0.13%
HMGR
5
0.13%
FPPS
5
0.13%
MCT/IspD
5
0.13%
AACT
5
0.13%
MVD
5
0.13%
TYDC_DDC
4
0.11%
6OMT_4OMT_SOMT
4
0.11%
CCoAOMT
4
0.11%
DXS
4
0.11%
XMT_MXMT_DXMT
3
0.08%
DWF1
3
0.08%
SQE
3
0.08%
MDS/IspF
3
0.08%
ADC
2
0.05%
HPPR
2
0.05%
CPI1
2
0.05%
FK
2
0.05%
GPPS
2
0.05%
PMK
2
0.05%
HMGS
2
0.05%
DXR
2
0.05%
HDS/IspG
2
0.05%
HDR/IspH
2
0.05%
DWF5
1
0.03%
DWF7
1
0.03%
HYD1
1
0.03%
CMK/IspE
1
0.03%
IDI
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 390 | 19 | UGT (148) | View species results |
| Alkaloid pathway | 321 | 19 | 7DLGT (70) | View species results |
| Phenylpropanoid pathway | 264 | 11 | POD (96) | View species results |
| Flavonoid pathway | 229 | 13 | UFGT (143) | View species results |
| Rosmarinic acid pathway | 99 | 7 | C4H (46) | View species results |
| Steroid pathway | 79 | 12 | CAS (36) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1394 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 221 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cfasscaffold9556_cov2420309060 | Alkaloid | TRI/TRII | low | borderline |
| Cfasscaffold9556_cov2420309090 | Alkaloid | TRI/TRII | medium | pass |
| Cfasscaffold978_cov2040325230 | Alkaloid | TRI/TRII | medium | pass |
| Cfasscaffold10493_cov2000006220 | Alkaloid | TYDC_DDC | medium | borderline |
| Cfasscaffold4608_cov2280178820 | Alkaloid | TYDC_DDC | medium | borderline |
| Cfasscaffold577_cov2260207910 | Alkaloid | TYDC_DDC | medium | borderline |
| Cfasscaffold6404_cov2090222640 | Alkaloid | TYDC_DDC | low | borderline |
| Cfasscaffold2665_cov2140120080 | Alkaloid | XMT_MXMT_DXMT | low | borderline |
| Cfasscaffold3401_cov2200144940 | Alkaloid | XMT_MXMT_DXMT | low | borderline |
| Cfasscaffold9850_cov1670326510 | Alkaloid | XMT_MXMT_DXMT | medium | borderline |
| Cfasscaffold10563_cov2380006740 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold1122_cov2280014940 | Flavonoid | 4CL | low | borderline |
| Cfasscaffold13590_cov2050037110 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold1423_cov2030042090 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold1582_cov2100054270 | Flavonoid | 4CL | low | borderline |
| Cfasscaffold15_cov2070055740 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold15_cov2070055750 | Flavonoid | 4CL | low | borderline |
| Cfasscaffold1622_cov1990058730 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold1707_cov2210066680 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold1712_cov2070067020 | Flavonoid | 4CL | low | borderline |
| Cfasscaffold1712_cov2070067080 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold1840_cov2040074450 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold1863_cov1930075680 | Flavonoid | 4CL | low | borderline |
| Cfasscaffold1897_cov2270077760 | Flavonoid | 4CL | low | borderline |
| Cfasscaffold19201_cov2340079880 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold2317_cov2120103100 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold2353_cov2070104730 | Flavonoid | 4CL | low | borderline |
| Cfasscaffold2780_cov2110123730 | Flavonoid | 4CL | low | borderline |
| Cfasscaffold2974_cov2230130030 | Flavonoid | 4CL | low | borderline |
| Cfasscaffold3110_cov2370135020 | Flavonoid | 4CL | low | borderline |
| Cfasscaffold3429_cov2030146210 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold3712_cov2120155120 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold3899_cov2270160580 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold3899_cov2270160600 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold555_cov2150202420 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold6705_cov2360228600 | Flavonoid | 4CL | low | borderline |
| Cfasscaffold712_cov2030235930 | Flavonoid | 4CL | low | borderline |
| Cfasscaffold719_cov2190237870 | Flavonoid | 4CL | low | borderline |
| Cfasscaffold7327_cov1850241130 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold7518_cov2180244880 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold8198_cov2120257710 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold9423_cov2320278640 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold95053_cov2170282630 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold95113_cov2120284800 | Flavonoid | 4CL | low | borderline |
| Cfasscaffold95677_cov2110314400 | Flavonoid | 4CL | medium | pass |
| Cfasscaffold1001_cov2000000300 | Flavonoid | ANR | low | borderline |
| Cfasscaffold1530_cov1880050430 | Flavonoid | ANR | medium | pass |
| Cfasscaffold1831_cov2120073420 | Flavonoid | ANR | low | borderline |
| Cfasscaffold1835_cov2040073610 | Flavonoid | ANR | medium | borderline |
| Cfasscaffold1835_cov2040073640 | Flavonoid | ANR | medium | borderline |