Chenopodium giganteum (chenopodium_giganteum)
Imported from atlas release summary for Chenopodium giganteum.
2146
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2146
Candidate Genes
BAHD
6.14%
C4H
5.9%
POD
5.62%
C3'H/CYP98A
5.5%
4CL
4.37%
NMT
3.09%
IFS
3.09%
T3O
2.97%
Other Families
63.31%
More Families (95)
CYP76
142
2.83%
UGT
135
2.69%
UFGT
134
2.67%
7DLGT
130
2.59%
F3'H/CYP75B
114
2.27%
F3H
114
2.27%
CAD
103
2.05%
SMT1/SMT2/SMT3
103
2.05%
DWF4/CYP90B1
94
1.87%
CYP71
94
1.87%
CAS
91
1.81%
BR6OX2/CYP85A2
90
1.79%
STR
88
1.75%
CODM/T6ODM
76
1.52%
TPS
75
1.5%
GES
69
1.38%
SGD
67
1.34%
LAC
66
1.32%
H6H
59
1.18%
CSE
59
1.18%
IFR
57
1.14%
TRI/TRII
56
1.12%
SLS
56
1.12%
COMT
52
1.04%
GS
50
1.0%
PYKS
45
0.9%
CYP90D1
44
0.88%
G8O/G8H
37
0.74%
T16H
35
0.7%
RAS
32
0.64%
16OMT
31
0.62%
HCT
31
0.62%
F3'5'H/CYP75A
29
0.58%
F5H/CYP84A
29
0.58%
7DLH
27
0.54%
8HGO
27
0.54%
ANR
27
0.54%
CYP51G1
26
0.52%
CHS
24
0.48%
PMT
23
0.46%
COR
22
0.44%
DFR
22
0.44%
CCR
22
0.44%
BR6OX1/CYP85A1
21
0.42%
FPPS
21
0.42%
CPR
20
0.4%
CPD/CYP90A1
20
0.4%
IO
19
0.38%
FNS
19
0.38%
HPPR
19
0.38%
AACT
19
0.38%
TAT
18
0.36%
CNMT
15
0.3%
MPO
15
0.3%
PAL
15
0.3%
ANS/LDOX
14
0.28%
BBE
13
0.26%
CCoAOMT
13
0.26%
ROT3/CYP90C1
13
0.26%
SQS/FDFT1
12
0.24%
GGPPS
10
0.2%
XMT_MXMT_DXMT
9
0.18%
DXS
9
0.18%
CYP719
8
0.16%
LAMT
8
0.16%
CHI
8
0.16%
SMO1/SMO2
8
0.16%
6OMT_4OMT_SOMT
7
0.14%
TDC
7
0.14%
NCS
7
0.14%
SQE
7
0.14%
MVK
7
0.14%
MVD
6
0.12%
GPPS
6
0.12%
CYP80B1
5
0.1%
ISY
5
0.1%
DET2
5
0.1%
PMK
5
0.1%
TYDC_DDC
4
0.08%
HYD1
4
0.08%
DWF7
4
0.08%
DWF1
4
0.08%
CPI1
4
0.08%
MDS/IspF
4
0.08%
FK
3
0.06%
DWF5
3
0.06%
CMK/IspE
3
0.06%
DXR
3
0.06%
HMGS
3
0.06%
MCT/IspD
3
0.06%
IDI
3
0.06%
HMGR
3
0.06%
HDR/IspH
3
0.06%
HDS/IspG
3
0.06%
FLS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 578 | 19 | BAHD (242) | View species results |
| Phenylpropanoid pathway | 516 | 11 | POD (248) | View species results |
| Alkaloid pathway | 487 | 18 | 7DLGT (74) | View species results |
| Flavonoid pathway | 228 | 10 | UFGT (129) | View species results |
| Steroid pathway | 172 | 13 | CAS (69) | View species results |
| Rosmarinic acid pathway | 165 | 7 | C4H (56) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1779 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 371 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Cf058757.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Cf059843.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Cf060248.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf060315.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Cf062440.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Cf062600.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf064917.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf065324.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Cf066308.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Cf066764.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf068225.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| Cf068706.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Cf068895.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf071579.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| Cf074514.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf075162.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Cf076551.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Cf076594.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf076596.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf077106.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Cf077167.mRNA1 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Cf078082.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Cf078467.mRNA1 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Cf001061.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf001071.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf001228.mRNA1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Cf003601.mRNA1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| Cf004792.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Cf006466.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Cf006538.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf006943.mRNA1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| Cf010057.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| Cf013086.mRNA1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Cf013588.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf015492.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| Cf015967.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Cf016153.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf016577.mRNA1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf017301.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Cf019091.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Cf019142.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf019146.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf019151.mRNA1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf021099.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Cf021620.mRNA1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Cf026207.mRNA1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Cf026598.mRNA1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Cf027818.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Cf027917.mRNA1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Cf028457.mRNA1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |