Chenopodium giganteum (chenopodium_giganteum)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 26.93% Phenylpropanoid pathway 24.04% Alkaloid pathway 22.69% Flavonoid pathway 10.62% Steroid pathway 8.01% Rosmarinic acid pathway 7.69%

Family Distribution

2146 Candidate Genes

BAHD 6.14% C4H 5.9% POD 5.62% C3'H/CYP98A 5.5% 4CL 4.37% NMT 3.09% IFS 3.09% T3O 2.97%

Other Families 63.31%

More Families (95)

CYP76 142 2.83% UGT 135 2.69% UFGT 134 2.67% 7DLGT 130 2.59% F3'H/CYP75B 114 2.27% F3H 114 2.27% CAD 103 2.05% SMT1/SMT2/SMT3 103 2.05% DWF4/CYP90B1 94 1.87% CYP71 94 1.87% CAS 91 1.81% BR6OX2/CYP85A2 90 1.79% STR 88 1.75% CODM/T6ODM 76 1.52% TPS 75 1.5% GES 69 1.38% SGD 67 1.34% LAC 66 1.32% H6H 59 1.18% CSE 59 1.18% IFR 57 1.14% TRI/TRII 56 1.12% SLS 56 1.12% COMT 52 1.04% GS 50 1.0% PYKS 45 0.9% CYP90D1 44 0.88% G8O/G8H 37 0.74% T16H 35 0.7% RAS 32 0.64% 16OMT 31 0.62% HCT 31 0.62% F3'5'H/CYP75A 29 0.58% F5H/CYP84A 29 0.58% 7DLH 27 0.54% 8HGO 27 0.54% ANR 27 0.54% CYP51G1 26 0.52% CHS 24 0.48% PMT 23 0.46% COR 22 0.44% DFR 22 0.44% CCR 22 0.44% BR6OX1/CYP85A1 21 0.42% FPPS 21 0.42% CPR 20 0.4% CPD/CYP90A1 20 0.4% IO 19 0.38% FNS 19 0.38% HPPR 19 0.38% AACT 19 0.38% TAT 18 0.36% CNMT 15 0.3% MPO 15 0.3% PAL 15 0.3% ANS/LDOX 14 0.28% BBE 13 0.26% CCoAOMT 13 0.26% ROT3/CYP90C1 13 0.26% SQS/FDFT1 12 0.24% GGPPS 10 0.2% XMT_MXMT_DXMT 9 0.18% DXS 9 0.18% CYP719 8 0.16% LAMT 8 0.16% CHI 8 0.16% SMO1/SMO2 8 0.16% 6OMT_4OMT_SOMT 7 0.14% TDC 7 0.14% NCS 7 0.14% SQE 7 0.14% MVK 7 0.14% MVD 6 0.12% GPPS 6 0.12% CYP80B1 5 0.1% ISY 5 0.1% DET2 5 0.1% PMK 5 0.1% TYDC_DDC 4 0.08% HYD1 4 0.08% DWF7 4 0.08% DWF1 4 0.08% CPI1 4 0.08% MDS/IspF 4 0.08% FK 3 0.06% DWF5 3 0.06% CMK/IspE 3 0.06% DXR 3 0.06% HMGS 3 0.06% MCT/IspD 3 0.06% IDI 3 0.06% HMGR 3 0.06% HDR/IspH 3 0.06% HDS/IspG 3 0.06% FLS 1 0.02%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	578	19	BAHD (242)	View species results
Phenylpropanoid pathway	516	11	POD (248)	View species results
Alkaloid pathway	487	18	7DLGT (74)	View species results
Flavonoid pathway	228	10	UFGT (129)	View species results
Steroid pathway	172	13	CAS (69)	View species results
Rosmarinic acid pathway	165	7	C4H (56)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	1779	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	371	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: TRI/TRII

Gene	Pathway	Family	Confidence	Status	Best Target
Cf001104.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Cf003576.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Cf004963.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
Cf007080.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
Cf009770.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Cf009772.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Cf012902.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Cf015953.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Cf019667.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
Cf019669.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
Cf020946.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00005__sp_P50162_TRN1_DATST
Cf021601.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Cf022154.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Cf024278.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Cf025072.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
Cf025933.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Cf025937.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Cf026280.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Cf032795.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
Cf033914.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
Cf035314.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Cf035726.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Cf035728.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Cf037877.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Cf040832.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Cf041317.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Cf044059.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
Cf044061.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00005__sp_P50162_TRN1_DATST
Cf045067.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00005__sp_P50162_TRN1_DATST
Cf045752.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Cf046330.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Cf047080.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
Cf048600.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Cf050336.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Cf050846.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Cf051651.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
Cf055372.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
Cf055373.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
Cf056123.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Cf056634.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Cf057503.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Cf058765.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
Cf059695.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
Cf063812.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
Cf063813.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
Cf064733.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00005__sp_P50162_TRN1_DATST
Cf065307.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Cf065846.mRNA1	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Cf068694.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Cf069622.mRNA1	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB