PlantSME Plant secondary metabolism enzyme database

Chenopodium giganteum (chenopodium_giganteum)

Imported from atlas release summary for Chenopodium giganteum.

2594
Candidate Protein Records
2146
Pathway-Level Records
5015
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 26.93% Phenylpropanoid pathway 24.04% Alkaloid pathway 22.69% Flavonoid pathway 10.62% Steroid pathway 8.01% Rosmarinic acid pathway 7.69%
Family Distribution
BAHD 6.14% C4H 5.9% POD 5.62% C3'H/CYP98A 5.5% 4CL 4.37% NMT 3.09% IFS 3.09% T3O 2.97%
Other Families 63.31%
More Families (95)
CYP76 142 2.83% UGT 135 2.69% UFGT 134 2.67% 7DLGT 130 2.59% F3'H/CYP75B 114 2.27% F3H 114 2.27% CAD 103 2.05% SMT1/SMT2/SMT3 103 2.05% DWF4/CYP90B1 94 1.87% CYP71 94 1.87% CAS 91 1.81% BR6OX2/CYP85A2 90 1.79% STR 88 1.75% CODM/T6ODM 76 1.52% TPS 75 1.5% GES 69 1.38% SGD 67 1.34% LAC 66 1.32% H6H 59 1.18% CSE 59 1.18% IFR 57 1.14% TRI/TRII 56 1.12% SLS 56 1.12% COMT 52 1.04% GS 50 1.0% PYKS 45 0.9% CYP90D1 44 0.88% G8O/G8H 37 0.74% T16H 35 0.7% RAS 32 0.64% 16OMT 31 0.62% HCT 31 0.62% F3'5'H/CYP75A 29 0.58% F5H/CYP84A 29 0.58% 7DLH 27 0.54% 8HGO 27 0.54% ANR 27 0.54% CYP51G1 26 0.52% CHS 24 0.48% PMT 23 0.46% COR 22 0.44% DFR 22 0.44% CCR 22 0.44% BR6OX1/CYP85A1 21 0.42% FPPS 21 0.42% CPR 20 0.4% CPD/CYP90A1 20 0.4% IO 19 0.38% FNS 19 0.38% HPPR 19 0.38% AACT 19 0.38% TAT 18 0.36% CNMT 15 0.3% MPO 15 0.3% PAL 15 0.3% ANS/LDOX 14 0.28% BBE 13 0.26% CCoAOMT 13 0.26% ROT3/CYP90C1 13 0.26% SQS/FDFT1 12 0.24% GGPPS 10 0.2% XMT_MXMT_DXMT 9 0.18% DXS 9 0.18% CYP719 8 0.16% LAMT 8 0.16% CHI 8 0.16% SMO1/SMO2 8 0.16% 6OMT_4OMT_SOMT 7 0.14% TDC 7 0.14% NCS 7 0.14% SQE 7 0.14% MVK 7 0.14% MVD 6 0.12% GPPS 6 0.12% CYP80B1 5 0.1% ISY 5 0.1% DET2 5 0.1% PMK 5 0.1% TYDC_DDC 4 0.08% HYD1 4 0.08% DWF7 4 0.08% DWF1 4 0.08% CPI1 4 0.08% MDS/IspF 4 0.08% FK 3 0.06% DWF5 3 0.06% CMK/IspE 3 0.06% DXR 3 0.06% HMGS 3 0.06% MCT/IspD 3 0.06% IDI 3 0.06% HMGR 3 0.06% HDR/IspH 3 0.06% HDS/IspG 3 0.06% FLS 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 578 19 BAHD (242) View species results
Phenylpropanoid pathway 516 11 POD (248) View species results
Alkaloid pathway 487 18 7DLGT (74) View species results
Flavonoid pathway 228 10 UFGT (129) View species results
Steroid pathway 172 13 CAS (69) View species results
Rosmarinic acid pathway 165 7 C4H (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1779 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 371 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Cf007227.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf007269.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf012515.mRNA1 Alkaloid GES medium pass GES__00010__sp_Q93YV0_GES_ARATH
Cf012600.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf012666.mRNA1 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Cf012668.mRNA1 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Cf012671.mRNA1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Cf013649.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf014750.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf014752.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf019840.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf019845.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf019846.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf019847.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf019848.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf019849.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf019851.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf019853.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf019856.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf019908.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf019909.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf019916.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf019917.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf021241.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf025881.mRNA1 Alkaloid GES low borderline GES__00008__sp_Q84ZW8_ACSS_MAIZE
Cf026511.mRNA1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Cf026514.mRNA1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Cf037988.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf040221.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf040415.mRNA1 Alkaloid GES medium pass GES__00010__sp_Q93YV0_GES_ARATH
Cf040416.mRNA1 Alkaloid GES medium pass GES__00010__sp_Q93YV0_GES_ARATH
Cf040520.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf040592.mRNA1 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Cf040600.mRNA1 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Cf040604.mRNA1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Cf042169.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf044222.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf044225.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf044227.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf044255.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf044257.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf044262.mRNA1 Alkaloid GES low borderline GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf048374.mRNA1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Cf048375.mRNA1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Cf049030.mRNA1 Alkaloid GES low borderline GES__00008__sp_Q84ZW8_ACSS_MAIZE
Cf063960.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf063964.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf063965.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf064000.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Cf064001.mRNA1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU