Chenopodium quinoa (chenopodium_quinoa)
Imported from atlas release summary for Chenopodium quinoa.
2670
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2670
Candidate Genes
C3'H/CYP98A
6.28%
C4H
6.2%
BAHD
5.11%
POD
4.96%
UGT
4.31%
UFGT
4.1%
7DLGT
3.99%
T3O
3.87%
Other Families
61.18%
More Families (96)
CYP76
242
3.67%
IFS
234
3.55%
4CL
231
3.5%
F3H
176
2.67%
F3'H/CYP75B
150
2.28%
DWF4/CYP90B1
149
2.26%
NMT
141
2.14%
BR6OX2/CYP85A2
134
2.03%
CODM/T6ODM
116
1.76%
CYP71
111
1.68%
H6H
96
1.46%
CAD
93
1.41%
STR
91
1.38%
TRI/TRII
75
1.14%
PYKS
74
1.12%
CAS
73
1.11%
SMT1/SMT2/SMT3
72
1.09%
CYP90D1
71
1.08%
HCT
70
1.06%
TPS
67
1.02%
COMT
66
1.0%
RAS
65
0.99%
T16H
62
0.94%
GES
59
0.9%
LAC
55
0.83%
GS
50
0.76%
IFR
50
0.76%
F3'5'H/CYP75A
49
0.74%
SGD
48
0.73%
G8O/G8H
48
0.73%
CSE
46
0.7%
FNS
45
0.68%
16OMT
44
0.67%
CYP51G1
43
0.65%
SLS
42
0.64%
PMT
40
0.61%
CHS
39
0.59%
ANR
35
0.53%
F5H/CYP84A
34
0.52%
IO
33
0.5%
FPPS
33
0.5%
BBE
32
0.49%
7DLH
29
0.44%
ANS/LDOX
29
0.44%
BR6OX1/CYP85A1
29
0.44%
COR
25
0.38%
CCR
24
0.36%
CCoAOMT
22
0.33%
PAL
21
0.32%
CPD/CYP90A1
20
0.3%
DFR
19
0.29%
TAT
19
0.29%
TDC
15
0.23%
8HGO
15
0.23%
CPR
15
0.23%
CNMT
14
0.21%
XMT_MXMT_DXMT
14
0.21%
HPPR
13
0.2%
ROT3/CYP90C1
13
0.2%
AACT
13
0.2%
6OMT_4OMT_SOMT
12
0.18%
CYP80B1
12
0.18%
LAMT
12
0.18%
GGPPS
12
0.18%
ISY
10
0.15%
CYP719
10
0.15%
SQS/FDFT1
10
0.15%
CHI
9
0.14%
NCS
8
0.12%
MPO
8
0.12%
TYDC_DDC
8
0.12%
SMO1/SMO2
7
0.11%
HYD1
7
0.11%
MCT/IspD
7
0.11%
DXS
7
0.11%
MVK
6
0.09%
DET2
5
0.08%
MVD
5
0.08%
SQE
4
0.06%
DWF1
4
0.06%
HMGR
4
0.06%
ADC
3
0.05%
FLS
3
0.05%
CPI1
3
0.05%
HMGS
3
0.05%
CYP80F1
2
0.03%
DWF5
2
0.03%
FK
2
0.03%
CMK/IspE
2
0.03%
MDS/IspF
2
0.03%
PMK
2
0.03%
IDI
2
0.03%
DXR
2
0.03%
HDS/IspG
2
0.03%
HDR/IspH
2
0.03%
DWF7
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 731 | 20 | UGT (266) | View species results |
| Phenylpropanoid pathway | 609 | 12 | POD (303) | View species results |
| Alkaloid pathway | 589 | 19 | 7DLGT (134) | View species results |
| Flavonoid pathway | 396 | 13 | UFGT (250) | View species results |
| Rosmarinic acid pathway | 224 | 7 | C4H (101) | View species results |
| Steroid pathway | 121 | 13 | CAS (49) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2595 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 472 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| CquiC_Quinoa_Scaffold_11050022580.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| CquiC_Quinoa_Scaffold_11280024770.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_12140037520.1 | Flavonoid | 4CL | medium | pass | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| CquiC_Quinoa_Scaffold_12800052820.1 | Flavonoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| CquiC_Quinoa_Scaffold_12830053190.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_13600059410.1 | Flavonoid | 4CL | medium | pass | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| CquiC_Quinoa_Scaffold_13850062810.1 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| CquiC_Quinoa_Scaffold_14030063630.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_14120066080.1 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| CquiC_Quinoa_Scaffold_14470070310.1 | Flavonoid | 4CL | low | borderline | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| CquiC_Quinoa_Scaffold_14800073090.1 | Flavonoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| CquiC_Quinoa_Scaffold_15020075000.1 | Flavonoid | 4CL | medium | pass | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| CquiC_Quinoa_Scaffold_15340083720.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| CquiC_Quinoa_Scaffold_15340083730.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| CquiC_Quinoa_Scaffold_15660085690.1 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| CquiC_Quinoa_Scaffold_16060089190.1 | Flavonoid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_17000104140.1 | Flavonoid | 4CL | low | borderline | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| CquiC_Quinoa_Scaffold_17830119740.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| CquiC_Quinoa_Scaffold_18170122560.1 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| CquiC_Quinoa_Scaffold_18170123260.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_18460128590.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| CquiC_Quinoa_Scaffold_18460129380.1 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| CquiC_Quinoa_Scaffold_19710141110.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_19710141640.1 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| CquiC_Quinoa_Scaffold_19920143850.1 | Flavonoid | 4CL | medium | pass | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| CquiC_Quinoa_Scaffold_20080152510.1 | Flavonoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| CquiC_Quinoa_Scaffold_20880171820.1 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| CquiC_Quinoa_Scaffold_20880171830.1 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| CquiC_Quinoa_Scaffold_21590179570.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_23060190880.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| CquiC_Quinoa_Scaffold_23060190890.1 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| CquiC_Quinoa_Scaffold_28370257230.1 | Flavonoid | 4CL | medium | pass | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| CquiC_Quinoa_Scaffold_28760263790.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_28880265130.1 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| CquiC_Quinoa_Scaffold_28880265730.1 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| CquiC_Quinoa_Scaffold_28880266630.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_28960269040.1 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| CquiC_Quinoa_Scaffold_29240272340.1 | Flavonoid | 4CL | low | borderline | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| CquiC_Quinoa_Scaffold_29330274330.1 | Flavonoid | 4CL | medium | pass | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| CquiC_Quinoa_Scaffold_32560301420.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| CquiC_Quinoa_Scaffold_32560303080.1 | Flavonoid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_32980306990.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_32980307030.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_32980307040.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_32980307050.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_33330311050.1 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| CquiC_Quinoa_Scaffold_33330313980.1 | Flavonoid | 4CL | low | borderline | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| CquiC_Quinoa_Scaffold_33560314400.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_33560314450.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| CquiC_Quinoa_Scaffold_33560314480.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |