PlantSME Plant secondary metabolism enzyme database

Chenopodium quinoa (chenopodium_quinoa)

Imported from atlas release summary for Chenopodium quinoa.

2670
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 27.38% Phenylpropanoid pathway 22.81% Alkaloid pathway 22.06% Flavonoid pathway 14.83% Rosmarinic acid pathway 8.39% Steroid pathway 4.53%
Family Distribution
C3'H/CYP98A 6.28% C4H 6.2% BAHD 5.11% POD 4.96% UGT 4.31% UFGT 4.1% 7DLGT 3.99% T3O 3.87%
Other Families 61.18%
More Families (96)
CYP76 242 3.67% IFS 234 3.55% 4CL 231 3.5% F3H 176 2.67% F3'H/CYP75B 150 2.28% DWF4/CYP90B1 149 2.26% NMT 141 2.14% BR6OX2/CYP85A2 134 2.03% CODM/T6ODM 116 1.76% CYP71 111 1.68% H6H 96 1.46% CAD 93 1.41% STR 91 1.38% TRI/TRII 75 1.14% PYKS 74 1.12% CAS 73 1.11% SMT1/SMT2/SMT3 72 1.09% CYP90D1 71 1.08% HCT 70 1.06% TPS 67 1.02% COMT 66 1.0% RAS 65 0.99% T16H 62 0.94% GES 59 0.9% LAC 55 0.83% GS 50 0.76% IFR 50 0.76% F3'5'H/CYP75A 49 0.74% SGD 48 0.73% G8O/G8H 48 0.73% CSE 46 0.7% FNS 45 0.68% 16OMT 44 0.67% CYP51G1 43 0.65% SLS 42 0.64% PMT 40 0.61% CHS 39 0.59% ANR 35 0.53% F5H/CYP84A 34 0.52% IO 33 0.5% FPPS 33 0.5% BBE 32 0.49% 7DLH 29 0.44% ANS/LDOX 29 0.44% BR6OX1/CYP85A1 29 0.44% COR 25 0.38% CCR 24 0.36% CCoAOMT 22 0.33% PAL 21 0.32% CPD/CYP90A1 20 0.3% DFR 19 0.29% TAT 19 0.29% TDC 15 0.23% 8HGO 15 0.23% CPR 15 0.23% CNMT 14 0.21% XMT_MXMT_DXMT 14 0.21% HPPR 13 0.2% ROT3/CYP90C1 13 0.2% AACT 13 0.2% 6OMT_4OMT_SOMT 12 0.18% CYP80B1 12 0.18% LAMT 12 0.18% GGPPS 12 0.18% ISY 10 0.15% CYP719 10 0.15% SQS/FDFT1 10 0.15% CHI 9 0.14% NCS 8 0.12% MPO 8 0.12% TYDC_DDC 8 0.12% SMO1/SMO2 7 0.11% HYD1 7 0.11% MCT/IspD 7 0.11% DXS 7 0.11% MVK 6 0.09% DET2 5 0.08% MVD 5 0.08% SQE 4 0.06% DWF1 4 0.06% HMGR 4 0.06% ADC 3 0.05% FLS 3 0.05% CPI1 3 0.05% HMGS 3 0.05% CYP80F1 2 0.03% DWF5 2 0.03% FK 2 0.03% CMK/IspE 2 0.03% MDS/IspF 2 0.03% PMK 2 0.03% IDI 2 0.03% DXR 2 0.03% HDS/IspG 2 0.03% HDR/IspH 2 0.03% DWF7 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 731 20 UGT (266) View species results
Phenylpropanoid pathway 609 12 POD (303) View species results
Alkaloid pathway 589 19 7DLGT (134) View species results
Flavonoid pathway 396 13 UFGT (250) View species results
Rosmarinic acid pathway 224 7 C4H (101) View species results
Steroid pathway 121 13 CAS (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Gene Pathway Family Confidence Status
CquiC_Quinoa_Scaffold_12890053650.1 Steroid ROT3/CYP90C1 medium borderline
CquiC_Quinoa_Scaffold_15660087240.1 Steroid ROT3/CYP90C1 low borderline
CquiC_Quinoa_Scaffold_16770100070.1 Steroid ROT3/CYP90C1 medium pass
CquiC_Quinoa_Scaffold_23700202200.1 Steroid ROT3/CYP90C1 medium borderline
CquiC_Quinoa_Scaffold_24870210350.1 Steroid ROT3/CYP90C1 medium borderline
CquiC_Quinoa_Scaffold_26460223860.1 Steroid ROT3/CYP90C1 medium borderline
CquiC_Quinoa_Scaffold_27160238740.1 Steroid ROT3/CYP90C1 low borderline
CquiC_Quinoa_Scaffold_34720337040.1 Steroid ROT3/CYP90C1 low borderline
CquiC_Quinoa_Scaffold_37840366130.1 Steroid ROT3/CYP90C1 low borderline
CquiC_Quinoa_Scaffold_37870368430.1 Steroid ROT3/CYP90C1 medium borderline
CquiC_Quinoa_Scaffold_38760386980.1 Steroid ROT3/CYP90C1 low borderline
CquiC_Quinoa_Scaffold_39660392710.1 Steroid ROT3/CYP90C1 low borderline
CquiC_Quinoa_Scaffold_42660425260.1 Steroid ROT3/CYP90C1 medium borderline