PlantSME Plant secondary metabolism enzyme database

Chlamydomonas schloesseri (chlamydomonas_schloesseri)

Imported from atlas release summary for Chlamydomonas schloesseri.

112
Candidate Genes
89
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 35 14 BAHD (14) View species results
Alkaloid pathway 29 8 GS (6) View species results
Phenylpropanoid pathway 23 5 POD (15) View species results
Steroid pathway 16 9 CAS (5) View species results
Flavonoid pathway 5 3 IFR (3) View species results
Rosmarinic acid pathway 4 2 CPR (3) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 209 BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 40 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
jgi|Chlsc1|13353|g13205.t1 Alkaloid 16OMT low borderline
jgi|Chlsc1|9439|g10501.t1 Alkaloid 16OMT low borderline
jgi|Chlsc1|13224|g4223.t1 Alkaloid 6OMT_4OMT_SOMT low borderline
jgi|Chlsc1|10539|g13863.t1 Alkaloid 7DLGT low borderline
jgi|Chlsc1|10370|g13308.t1 Alkaloid 8HGO medium borderline
jgi|Chlsc1|10371|g13309.t1 Alkaloid 8HGO medium borderline
jgi|Chlsc1|14574|g1074.t1 Alkaloid ADC low borderline
jgi|Chlsc1|10184|g12673.t1 Alkaloid BBE low borderline
jgi|Chlsc1|14670|g5512.t1 Alkaloid BBE low borderline
jgi|Chlsc1|9002|g2463.t1 Alkaloid BBE low borderline
jgi|Chlsc1|11212|g5033.t1 Alkaloid CNMT low borderline
jgi|Chlsc1|13129|g328.t1 Alkaloid CNMT low borderline
jgi|Chlsc1|13201|g4201.t1 Alkaloid CNMT low borderline
jgi|Chlsc1|1414|g10615.t1 Alkaloid CNMT low borderline
jgi|Chlsc1|15019|g7267.t1 Alkaloid CNMT low borderline
jgi|Chlsc1|15020|g7267.t2 Alkaloid CNMT low borderline
jgi|Chlsc1|15387|g10167.t1 Alkaloid CNMT low borderline
jgi|Chlsc1|15882|g9804.t1 Alkaloid CNMT medium borderline
jgi|Chlsc1|16066|g4576.t1 Alkaloid CNMT low borderline
jgi|Chlsc1|16067|g4577.t1 Alkaloid CNMT low borderline
jgi|Chlsc1|4736|g12183.t1 Alkaloid CNMT low borderline
jgi|Chlsc1|4737|g12183.t3 Alkaloid CNMT low borderline
jgi|Chlsc1|4738|g12183.t2 Alkaloid CNMT low borderline
jgi|Chlsc1|5192|g2586.t1 Alkaloid CNMT medium pass
jgi|Chlsc1|7599|g11166.t1 Alkaloid CNMT low borderline
jgi|Chlsc1|9029|g2490.t1 Alkaloid CNMT low borderline
jgi|Chlsc1|9230|g5851.t1 Alkaloid CNMT low borderline
jgi|Chlsc1|989|g8201.t1 Alkaloid CNMT low borderline
jgi|Chlsc1|12792|g1474.t1 Alkaloid CODM/T6ODM low borderline
jgi|Chlsc1|3597|g451.t1 Alkaloid COR medium pass
jgi|Chlsc1|4629|g12075.t1 Alkaloid COR low borderline
jgi|Chlsc1|6857|g15264.t1 Alkaloid COR low borderline
jgi|Chlsc1|5015|g12481.t1 Alkaloid CYP719 medium borderline
jgi|Chlsc1|8311|g8621.t1 Alkaloid CYP719 medium borderline
jgi|Chlsc1|8816|g6512.t1 Alkaloid CYP719 medium borderline
jgi|Chlsc1|9309|g5926.t1 Alkaloid CYP719 medium borderline
jgi|Chlsc1|15208|g7458.t1 Alkaloid CYP80B1 medium borderline
jgi|Chlsc1|14095|g15064.t1 Alkaloid CYP80F1 medium borderline
jgi|Chlsc1|3961|g4054.t1 Alkaloid CYP80F1 medium borderline
jgi|Chlsc1|610|g16792.t1 Alkaloid CYP80F1 medium borderline
jgi|Chlsc1|12006|g13451.t1 Alkaloid G8O/G8H medium borderline
jgi|Chlsc1|8554|g9421.t1 Alkaloid G8O/G8H medium borderline
jgi|Chlsc1|10067|g4974.t1 Alkaloid GS high pass
jgi|Chlsc1|11746|g15505.t1 Alkaloid GS low borderline
jgi|Chlsc1|12845|g1531.t1 Alkaloid GS low borderline
jgi|Chlsc1|15352|g10131.t1 Alkaloid GS high pass
jgi|Chlsc1|1586|g10793.t1 Alkaloid GS medium pass
jgi|Chlsc1|1768|g3836.t1 Alkaloid GS high pass
jgi|Chlsc1|1774|g3842.t1 Alkaloid GS high pass
jgi|Chlsc1|2027|g15905.t1 Alkaloid GS low borderline