Chlamydomonas schloesseri (chlamydomonas_schloesseri)
Imported from atlas release summary for Chlamydomonas schloesseri.
112
Candidate Genes
89
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
112
Candidate Genes
BAHD
6.34%
4CL
6.18%
C3'H/CYP98A
6.18%
C4H
5.68%
NMT
4.51%
STR
4.01%
IFR
3.84%
CYP76
3.67%
Other Families
59.6%
More Families (81)
POD
19
3.17%
CNMT
18
3.01%
FNS
18
3.01%
DWF4/CYP90B1
18
3.01%
CSE
17
2.84%
CYP71
15
2.5%
GS
13
2.17%
T3O
12
2.0%
TRI/TRII
12
2.0%
SMT1/SMT2/SMT3
12
2.0%
CYP90D1
12
2.0%
IFS
11
1.84%
CAD
11
1.84%
CPR
11
1.84%
IO
9
1.5%
PYKS
7
1.17%
ANR
7
1.17%
SLS
6
1.0%
BR6OX2/CYP85A2
5
0.83%
CAS
5
0.83%
DET2
5
0.83%
CYP719
4
0.67%
F3'5'H/CYP75A
4
0.67%
F3'H/CYP75B
4
0.67%
BBE
3
0.5%
MPO
3
0.5%
CYP80F1
3
0.5%
COR
3
0.5%
ODC
3
0.5%
PAL
3
0.5%
CCR
3
0.5%
SQS/FDFT1
3
0.5%
AACT
3
0.5%
GGPPS
3
0.5%
FPPS
3
0.5%
MVK
3
0.5%
CMK/IspE
3
0.5%
8HGO
2
0.33%
PMT
2
0.33%
G8O/G8H
2
0.33%
T16H
2
0.33%
16OMT
2
0.33%
NCS
2
0.33%
TDC
2
0.33%
UFGT
2
0.33%
F3H
2
0.33%
LAC
2
0.33%
F5H/CYP84A
2
0.33%
BR6OX1/CYP85A1
2
0.33%
CPI1
2
0.33%
CPD/CYP90A1
2
0.33%
HYD1
2
0.33%
IDI
2
0.33%
HDS/IspG
2
0.33%
DXS
2
0.33%
MCT/IspD
2
0.33%
7DLGT
1
0.17%
CODM/T6ODM
1
0.17%
6OMT_4OMT_SOMT
1
0.17%
ADC
1
0.17%
CYP80B1
1
0.17%
H6H
1
0.17%
TYDC_DDC
1
0.17%
CHI
1
0.17%
DFR
1
0.17%
CCoAOMT
1
0.17%
HCT
1
0.17%
COMT
1
0.17%
TAT
1
0.17%
RAS
1
0.17%
FK
1
0.17%
DWF7
1
0.17%
SQE
1
0.17%
CYP51G1
1
0.17%
ROT3/CYP90C1
1
0.17%
MVD
1
0.17%
HDR/IspH
1
0.17%
MDS/IspF
1
0.17%
DXR
1
0.17%
UGT
1
0.17%
HMGS
1
0.17%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 35 | 14 | BAHD (14) | View species results |
| Alkaloid pathway | 29 | 8 | GS (6) | View species results |
| Phenylpropanoid pathway | 23 | 5 | POD (15) | View species results |
| Steroid pathway | 16 | 9 | CAS (5) | View species results |
| Flavonoid pathway | 5 | 3 | IFR (3) | View species results |
| Rosmarinic acid pathway | 4 | 2 | CPR (3) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 209 | BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 40 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| jgi|Chlsc1|10108|g12589.t1 | Steroid | BR6OX2/CYP85A2 | low | borderline |
| jgi|Chlsc1|12006|g13451.t1 | Steroid | BR6OX2/CYP85A2 | low | borderline |
| jgi|Chlsc1|12359|g6935.t1 | Steroid | BR6OX2/CYP85A2 | low | borderline |
| jgi|Chlsc1|8311|g8621.t1 | Steroid | BR6OX2/CYP85A2 | low | borderline |
| jgi|Chlsc1|8816|g6512.t1 | Steroid | BR6OX2/CYP85A2 | low | borderline |