Chorisodontium acidophyllum (chorisodontium_acidophyllum)
Imported from atlas release summary for Chorisodontium acidophyllum.
651
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
651
Candidate Genes
C4H
6.15%
C3'H/CYP98A
6.1%
BAHD
5.53%
POD
4.67%
4CL
4.44%
CYP76
4.27%
NMT
3.59%
IFS
3.02%
Other Families
62.22%
More Families (96)
T3O
49
2.79%
STR
48
2.74%
GS
47
2.68%
DWF4/CYP90B1
42
2.39%
F3'H/CYP75B
40
2.28%
BR6OX2/CYP85A2
40
2.28%
PAL
36
2.05%
UGT
35
1.99%
7DLGT
34
1.94%
F3H
34
1.94%
UFGT
33
1.88%
PYKS
32
1.82%
IFR
29
1.65%
CAD
26
1.48%
CHS
24
1.37%
CODM/T6ODM
23
1.31%
SMT1/SMT2/SMT3
22
1.25%
COMT
20
1.14%
LAC
20
1.14%
IO
19
1.08%
G8O/G8H
17
0.97%
CPR
17
0.97%
H6H
16
0.91%
F3'5'H/CYP75A
16
0.91%
T16H
15
0.85%
TRI/TRII
15
0.85%
ANR
15
0.85%
COR
14
0.8%
CYP71
13
0.74%
RAS
12
0.68%
CYP90D1
12
0.68%
16OMT
11
0.63%
SLS
11
0.63%
CSE
11
0.63%
CAS
11
0.63%
LAMT
9
0.51%
CNMT
9
0.51%
HCT
9
0.51%
CPD/CYP90A1
9
0.51%
NCS
8
0.46%
SQS/FDFT1
8
0.46%
7DLH
7
0.4%
SGD
7
0.4%
FNS
7
0.4%
BR6OX1/CYP85A1
7
0.4%
PMT
6
0.34%
BBE
6
0.34%
CYP719
6
0.34%
DFR
6
0.34%
F5H/CYP84A
6
0.34%
AACT
6
0.34%
8HGO
5
0.28%
TDC
5
0.28%
6OMT_4OMT_SOMT
5
0.28%
DWF5
5
0.28%
ROT3/CYP90C1
5
0.28%
DET2
5
0.28%
MVK
5
0.28%
MDS/IspF
5
0.28%
MPO
4
0.23%
CCR
4
0.23%
TAT
4
0.23%
CYP80B1
3
0.17%
ADC
3
0.17%
ANS/LDOX
3
0.17%
CHI
3
0.17%
CCoAOMT
3
0.17%
SQE
3
0.17%
FPPS
3
0.17%
GGPPS
3
0.17%
ISY
2
0.11%
GES
2
0.11%
ODC
2
0.11%
TYDC_DDC
2
0.11%
CYP51G1
2
0.11%
SMO1/SMO2
2
0.11%
HYD1
2
0.11%
HDS/IspG
2
0.11%
MCT/IspD
2
0.11%
TPS
2
0.11%
CMK/IspE
2
0.11%
DXR
2
0.11%
HDR/IspH
2
0.11%
MVD
2
0.11%
HMGS
2
0.11%
XMT_MXMT_DXMT
1
0.06%
FLS
1
0.06%
HPPR
1
0.06%
CPI1
1
0.06%
DWF1
1
0.06%
FK
1
0.06%
DWF7
1
0.06%
DXS
1
0.06%
PMK
1
0.06%
HMGR
1
0.06%
IDI
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 164 | 10 | POD (74) | View species results |
| Terpenoid pathway | 153 | 21 | BAHD (59) | View species results |
| Alkaloid pathway | 149 | 16 | NMT (27) | View species results |
| Flavonoid pathway | 84 | 7 | UFGT (29) | View species results |
| Rosmarinic acid pathway | 62 | 7 | C4H (25) | View species results |
| Steroid pathway | 39 | 12 | CAS (10) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 662 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 118 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Cacid1567290011980 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid1601540016500 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| Cacid1615450018000 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacid1752330020020 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid1848490023890 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacid1850220025010 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid1855270029190 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid1889750034160 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2100800044550 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacid2220860054050 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| Cacid2220860054060 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacid2231590059120 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2251100064280 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2251310064700 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2255260067560 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacid2323070080470 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2325960082310 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2330780086210 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2344770093580 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2376330099130 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2387740109470 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2388840111810 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacid2407450120290 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2408780121710 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacid2422980139410 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacid2435420143270 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacid2436320144310 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2436360144360 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2436390144370 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2452450161410 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2458880173360 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2459880176400 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2471430190340 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2472390192030 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacid2472540192250 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2479020205050 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2487670219580 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2491760227160 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2491950227930 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2493980232730 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2493980232740 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2494870236760 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2495510237560 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2501370248390 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2505620256030 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2508740264660 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2517190285190 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacid2528840308030 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |