PlantSME Plant secondary metabolism enzyme database

Chorisodontium aciphyllum (chorisodontium_aciphyllum)

Imported from atlas release summary for Chorisodontium aciphyllum.

658
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 26.6% Terpenoid pathway 23.4% Alkaloid pathway 21.12% Flavonoid pathway 12.61% Rosmarinic acid pathway 10.64% Steroid pathway 5.62%
Family Distribution
C4H 6.42% C3'H/CYP98A 6.14% BAHD 5.52% 4CL 4.74% CYP76 4.52% POD 4.46% NMT 3.96% IFS 3.18%
Other Families 61.05%
More Families (95)
STR 53 2.96% T3O 49 2.73% GS 44 2.46% F3'H/CYP75B 44 2.46% BR6OX2/CYP85A2 42 2.34% DWF4/CYP90B1 41 2.29% PAL 39 2.18% F3H 37 2.06% 7DLGT 35 1.95% UGT 35 1.95% UFGT 33 1.84% COMT 32 1.79% IFR 31 1.73% PYKS 25 1.4% CODM/T6ODM 25 1.4% SMT1/SMT2/SMT3 23 1.28% IO 22 1.23% 16OMT 20 1.12% CAD 20 1.12% CHS 17 0.95% G8O/G8H 15 0.84% F3'5'H/CYP75A 15 0.84% RAS 15 0.84% TRI/TRII 14 0.78% H6H 14 0.78% CYP90D1 14 0.78% SLS 13 0.73% COR 13 0.73% LAC 13 0.73% HCT 13 0.73% CPD/CYP90A1 13 0.73% CYP71 13 0.73% T16H 12 0.67% CPR 12 0.67% LAMT 10 0.56% CAS 10 0.56% SGD 9 0.5% 8HGO 9 0.5% ANR 9 0.5% CSE 9 0.5% CYP719 8 0.45% BR6OX1/CYP85A1 8 0.45% 7DLH 7 0.39% FNS 7 0.39% SQS/FDFT1 7 0.39% AACT 7 0.39% NCS 6 0.33% CCR 6 0.33% DET2 6 0.33% DWF5 6 0.33% TDC 5 0.28% BBE 5 0.28% PMT 5 0.28% DFR 5 0.28% F5H/CYP84A 5 0.28% CNMT 4 0.22% MPO 4 0.22% TAT 4 0.22% MVK 4 0.22% FPPS 4 0.22% 6OMT_4OMT_SOMT 3 0.17% ADC 3 0.17% CYP80B1 3 0.17% CHI 3 0.17% ANS/LDOX 3 0.17% CYP51G1 3 0.17% SQE 3 0.17% MDS/IspF 3 0.17% GGPPS 3 0.17% TYDC_DDC 2 0.11% ISY 2 0.11% GES 2 0.11% FLS 2 0.11% CCoAOMT 2 0.11% SMO1/SMO2 2 0.11% ROT3/CYP90C1 2 0.11% HMGS 2 0.11% DXS 2 0.11% HDR/IspH 2 0.11% MVD 2 0.11% PMK 2 0.11% HDS/IspG 2 0.11% MCT/IspD 2 0.11% DXR 2 0.11% TPS 2 0.11% CYP80F1 1 0.06% HPPR 1 0.06% DWF1 1 0.06% HYD1 1 0.06% CPI1 1 0.06% FK 1 0.06% DWF7 1 0.06% CMK/IspE 1 0.06% HMGR 1 0.06% IDI 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (74) View species results
Terpenoid pathway 154 20 BAHD (66) View species results
Alkaloid pathway 139 16 NMT (32) View species results
Flavonoid pathway 83 7 UFGT (30) View species results
Rosmarinic acid pathway 70 7 C4H (27) View species results
Steroid pathway 37 13 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 693 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 127 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
Cacipscaffold_1490027610 Alkaloid SLS medium borderline
Cacipscaffold_1600038290 Alkaloid SLS medium borderline
Cacipscaffold_1720047860 Alkaloid SLS medium borderline
Cacipscaffold_1720048010 Alkaloid SLS medium borderline
Cacipscaffold_2340078590 Alkaloid SLS medium borderline
Cacipscaffold_2340078610 Alkaloid SLS medium borderline
Cacipscaffold_2850112140 Alkaloid SLS medium borderline
Cacipscaffold_3130129760 Alkaloid SLS medium borderline
Cacipscaffold_5910294810 Alkaloid SLS low borderline
Cacipscaffold_6330327620 Alkaloid SLS medium borderline
Cacipscaffold_6570340010 Alkaloid SLS medium borderline
Cacipscaffold_820356030 Alkaloid SLS medium borderline
Cacipscaffold_880359930 Alkaloid SLS medium borderline