Chorisodontium aciphyllum (chorisodontium_aciphyllum)
Imported from atlas release summary for Chorisodontium aciphyllum.
658
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
658
Candidate Genes
C4H
6.42%
C3'H/CYP98A
6.14%
BAHD
5.52%
4CL
4.74%
CYP76
4.52%
POD
4.46%
NMT
3.96%
IFS
3.18%
Other Families
61.05%
More Families (95)
STR
53
2.96%
T3O
49
2.73%
GS
44
2.46%
F3'H/CYP75B
44
2.46%
BR6OX2/CYP85A2
42
2.34%
DWF4/CYP90B1
41
2.29%
PAL
39
2.18%
F3H
37
2.06%
7DLGT
35
1.95%
UGT
35
1.95%
UFGT
33
1.84%
COMT
32
1.79%
IFR
31
1.73%
PYKS
25
1.4%
CODM/T6ODM
25
1.4%
SMT1/SMT2/SMT3
23
1.28%
IO
22
1.23%
16OMT
20
1.12%
CAD
20
1.12%
CHS
17
0.95%
G8O/G8H
15
0.84%
F3'5'H/CYP75A
15
0.84%
RAS
15
0.84%
TRI/TRII
14
0.78%
H6H
14
0.78%
CYP90D1
14
0.78%
SLS
13
0.73%
COR
13
0.73%
LAC
13
0.73%
HCT
13
0.73%
CPD/CYP90A1
13
0.73%
CYP71
13
0.73%
T16H
12
0.67%
CPR
12
0.67%
LAMT
10
0.56%
CAS
10
0.56%
SGD
9
0.5%
8HGO
9
0.5%
ANR
9
0.5%
CSE
9
0.5%
CYP719
8
0.45%
BR6OX1/CYP85A1
8
0.45%
7DLH
7
0.39%
FNS
7
0.39%
SQS/FDFT1
7
0.39%
AACT
7
0.39%
NCS
6
0.33%
CCR
6
0.33%
DET2
6
0.33%
DWF5
6
0.33%
TDC
5
0.28%
BBE
5
0.28%
PMT
5
0.28%
DFR
5
0.28%
F5H/CYP84A
5
0.28%
CNMT
4
0.22%
MPO
4
0.22%
TAT
4
0.22%
MVK
4
0.22%
FPPS
4
0.22%
6OMT_4OMT_SOMT
3
0.17%
ADC
3
0.17%
CYP80B1
3
0.17%
CHI
3
0.17%
ANS/LDOX
3
0.17%
CYP51G1
3
0.17%
SQE
3
0.17%
MDS/IspF
3
0.17%
GGPPS
3
0.17%
TYDC_DDC
2
0.11%
ISY
2
0.11%
GES
2
0.11%
FLS
2
0.11%
CCoAOMT
2
0.11%
SMO1/SMO2
2
0.11%
ROT3/CYP90C1
2
0.11%
HMGS
2
0.11%
DXS
2
0.11%
HDR/IspH
2
0.11%
MVD
2
0.11%
PMK
2
0.11%
HDS/IspG
2
0.11%
MCT/IspD
2
0.11%
DXR
2
0.11%
TPS
2
0.11%
CYP80F1
1
0.06%
HPPR
1
0.06%
DWF1
1
0.06%
HYD1
1
0.06%
CPI1
1
0.06%
FK
1
0.06%
DWF7
1
0.06%
CMK/IspE
1
0.06%
HMGR
1
0.06%
IDI
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 175 | 10 | POD (74) | View species results |
| Terpenoid pathway | 154 | 20 | BAHD (66) | View species results |
| Alkaloid pathway | 139 | 16 | NMT (32) | View species results |
| Flavonoid pathway | 83 | 7 | UFGT (30) | View species results |
| Rosmarinic acid pathway | 70 | 7 | C4H (27) | View species results |
| Steroid pathway | 37 | 13 | CAS (8) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 693 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 127 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Cacipscaffold_1020001190 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_1130008790 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacipscaffold_1220013980 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacipscaffold_1270016650 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_1340021430 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_1460026180 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_1560032920 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_1720047600 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_1920056620 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_1960058830 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_2200075580 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacipscaffold_2390081810 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_2510088570 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_2550090420 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_3050126570 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_3120128600 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_3160133230 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_3250141910 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacipscaffold_3390145690 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_3560154480 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_3600157320 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_3630158920 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_3770165500 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacipscaffold_3770165520 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| Cacipscaffold_3770166600 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_3830171070 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_400179620 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacipscaffold_400180400 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacipscaffold_400180420 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacipscaffold_4030182650 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_4040183950 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_4550206700 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_4550206720 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_4620211930 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_490232760 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_5020238300 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_5020238350 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_5050241210 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_5160252410 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_5960301300 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cacipscaffold_600305110 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_6060312740 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_6280325540 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| Cacipscaffold_6340328310 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_6350328860 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_6560339730 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_6580340840 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_710350090 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_790353360 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cacipscaffold_810354220 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |