PlantSME Plant secondary metabolism enzyme database

Chorisodontium aciphyllum (chorisodontium_aciphyllum)

Imported from atlas release summary for Chorisodontium aciphyllum.

951
Candidate Protein Records
658
Pathway-Level Records
1792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Phenylpropanoid pathway 26.6% Terpenoid pathway 23.4% Alkaloid pathway 21.12% Flavonoid pathway 12.61% Rosmarinic acid pathway 10.64% Steroid pathway 5.62%
Family Distribution
C4H 6.42% C3'H/CYP98A 6.14% BAHD 5.52% 4CL 4.74% CYP76 4.52% POD 4.46% NMT 3.96% IFS 3.18%
Other Families 61.05%
More Families (95)
STR 53 2.96% T3O 49 2.73% GS 44 2.46% F3'H/CYP75B 44 2.46% BR6OX2/CYP85A2 42 2.34% DWF4/CYP90B1 41 2.29% PAL 39 2.18% F3H 37 2.06% 7DLGT 35 1.95% UGT 35 1.95% UFGT 33 1.84% COMT 32 1.79% IFR 31 1.73% PYKS 25 1.4% CODM/T6ODM 25 1.4% SMT1/SMT2/SMT3 23 1.28% IO 22 1.23% 16OMT 20 1.12% CAD 20 1.12% CHS 17 0.95% G8O/G8H 15 0.84% F3'5'H/CYP75A 15 0.84% RAS 15 0.84% TRI/TRII 14 0.78% H6H 14 0.78% CYP90D1 14 0.78% SLS 13 0.73% COR 13 0.73% LAC 13 0.73% HCT 13 0.73% CPD/CYP90A1 13 0.73% CYP71 13 0.73% T16H 12 0.67% CPR 12 0.67% LAMT 10 0.56% CAS 10 0.56% SGD 9 0.5% 8HGO 9 0.5% ANR 9 0.5% CSE 9 0.5% CYP719 8 0.45% BR6OX1/CYP85A1 8 0.45% 7DLH 7 0.39% FNS 7 0.39% SQS/FDFT1 7 0.39% AACT 7 0.39% NCS 6 0.33% CCR 6 0.33% DET2 6 0.33% DWF5 6 0.33% TDC 5 0.28% BBE 5 0.28% PMT 5 0.28% DFR 5 0.28% F5H/CYP84A 5 0.28% CNMT 4 0.22% MPO 4 0.22% TAT 4 0.22% MVK 4 0.22% FPPS 4 0.22% 6OMT_4OMT_SOMT 3 0.17% ADC 3 0.17% CYP80B1 3 0.17% CHI 3 0.17% ANS/LDOX 3 0.17% CYP51G1 3 0.17% SQE 3 0.17% MDS/IspF 3 0.17% GGPPS 3 0.17% TYDC_DDC 2 0.11% ISY 2 0.11% GES 2 0.11% FLS 2 0.11% CCoAOMT 2 0.11% SMO1/SMO2 2 0.11% ROT3/CYP90C1 2 0.11% HMGS 2 0.11% DXS 2 0.11% HDR/IspH 2 0.11% MVD 2 0.11% PMK 2 0.11% HDS/IspG 2 0.11% MCT/IspD 2 0.11% DXR 2 0.11% TPS 2 0.11% CYP80F1 1 0.06% HPPR 1 0.06% DWF1 1 0.06% HYD1 1 0.06% CPI1 1 0.06% FK 1 0.06% DWF7 1 0.06% CMK/IspE 1 0.06% HMGR 1 0.06% IDI 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 175 10 POD (74) View species results
Terpenoid pathway 154 20 BAHD (66) View species results
Alkaloid pathway 139 16 NMT (32) View species results
Flavonoid pathway 83 7 UFGT (30) View species results
Rosmarinic acid pathway 70 7 C4H (27) View species results
Steroid pathway 37 13 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 693 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 127 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Cacipscaffold_4760218230 Rosmarinic Acid PAL medium pass
Cacipscaffold_4760218240 Rosmarinic Acid PAL medium pass
Cacipscaffold_5110248440 Rosmarinic Acid PAL medium pass
Cacipscaffold_5330263830 Rosmarinic Acid PAL low borderline
Cacipscaffold_6510337540 Rosmarinic Acid PAL high pass
Cacipscaffold_6520338310 Rosmarinic Acid PAL high pass
Cacipscaffold_1720049610 Rosmarinic Acid RAS medium pass
Cacipscaffold_1980060410 Rosmarinic Acid RAS medium pass
Cacipscaffold_2180072500 Rosmarinic Acid RAS low borderline
Cacipscaffold_2600093260 Rosmarinic Acid RAS medium pass
Cacipscaffold_2600093270 Rosmarinic Acid RAS medium pass
Cacipscaffold_2680095630 Rosmarinic Acid RAS low borderline
Cacipscaffold_3160132180 Rosmarinic Acid RAS medium pass
Cacipscaffold_3330143440 Rosmarinic Acid RAS low borderline
Cacipscaffold_3480150070 Rosmarinic Acid RAS medium pass
Cacipscaffold_420192490 Rosmarinic Acid RAS low borderline
Cacipscaffold_4840228480 Rosmarinic Acid RAS low borderline
Cacipscaffold_5160252610 Rosmarinic Acid RAS medium pass
Cacipscaffold_600305410 Rosmarinic Acid RAS medium pass
Cacipscaffold_6320327320 Rosmarinic Acid RAS low borderline
Cacipscaffold_840356650 Rosmarinic Acid RAS low borderline
Cacipscaffold_2320078070 Rosmarinic Acid TAT medium pass
Cacipscaffold_3130129370 Rosmarinic Acid TAT medium pass
Cacipscaffold_3700163000 Rosmarinic Acid TAT medium pass
Cacipscaffold_4240194850 Rosmarinic Acid TAT low borderline