Chorisodontium aciphyllum (chorisodontium_aciphyllum)
Imported from atlas release summary for Chorisodontium aciphyllum.
951
Candidate Protein Records
658
Pathway-Level Records
1792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1792
Family-Level Calls
C4H
6.42%
C3'H/CYP98A
6.14%
BAHD
5.52%
4CL
4.74%
CYP76
4.52%
POD
4.46%
NMT
3.96%
IFS
3.18%
Other Families
61.05%
More Families (95)
STR
53
2.96%
T3O
49
2.73%
GS
44
2.46%
F3'H/CYP75B
44
2.46%
BR6OX2/CYP85A2
42
2.34%
DWF4/CYP90B1
41
2.29%
PAL
39
2.18%
F3H
37
2.06%
7DLGT
35
1.95%
UGT
35
1.95%
UFGT
33
1.84%
COMT
32
1.79%
IFR
31
1.73%
PYKS
25
1.4%
CODM/T6ODM
25
1.4%
SMT1/SMT2/SMT3
23
1.28%
IO
22
1.23%
16OMT
20
1.12%
CAD
20
1.12%
CHS
17
0.95%
G8O/G8H
15
0.84%
F3'5'H/CYP75A
15
0.84%
RAS
15
0.84%
TRI/TRII
14
0.78%
H6H
14
0.78%
CYP90D1
14
0.78%
SLS
13
0.73%
COR
13
0.73%
LAC
13
0.73%
HCT
13
0.73%
CPD/CYP90A1
13
0.73%
CYP71
13
0.73%
T16H
12
0.67%
CPR
12
0.67%
LAMT
10
0.56%
CAS
10
0.56%
SGD
9
0.5%
8HGO
9
0.5%
ANR
9
0.5%
CSE
9
0.5%
CYP719
8
0.45%
BR6OX1/CYP85A1
8
0.45%
7DLH
7
0.39%
FNS
7
0.39%
SQS/FDFT1
7
0.39%
AACT
7
0.39%
NCS
6
0.33%
CCR
6
0.33%
DET2
6
0.33%
DWF5
6
0.33%
TDC
5
0.28%
BBE
5
0.28%
PMT
5
0.28%
DFR
5
0.28%
F5H/CYP84A
5
0.28%
CNMT
4
0.22%
MPO
4
0.22%
TAT
4
0.22%
MVK
4
0.22%
FPPS
4
0.22%
6OMT_4OMT_SOMT
3
0.17%
ADC
3
0.17%
CYP80B1
3
0.17%
CHI
3
0.17%
ANS/LDOX
3
0.17%
CYP51G1
3
0.17%
SQE
3
0.17%
MDS/IspF
3
0.17%
GGPPS
3
0.17%
TYDC_DDC
2
0.11%
ISY
2
0.11%
GES
2
0.11%
FLS
2
0.11%
CCoAOMT
2
0.11%
SMO1/SMO2
2
0.11%
ROT3/CYP90C1
2
0.11%
HMGS
2
0.11%
DXS
2
0.11%
HDR/IspH
2
0.11%
MVD
2
0.11%
PMK
2
0.11%
HDS/IspG
2
0.11%
MCT/IspD
2
0.11%
DXR
2
0.11%
TPS
2
0.11%
CYP80F1
1
0.06%
HPPR
1
0.06%
DWF1
1
0.06%
HYD1
1
0.06%
CPI1
1
0.06%
FK
1
0.06%
DWF7
1
0.06%
CMK/IspE
1
0.06%
HMGR
1
0.06%
IDI
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 175 | 10 | POD (74) | View species results |
| Terpenoid pathway | 154 | 20 | BAHD (66) | View species results |
| Alkaloid pathway | 139 | 16 | NMT (32) | View species results |
| Flavonoid pathway | 83 | 7 | UFGT (30) | View species results |
| Rosmarinic acid pathway | 70 | 7 | C4H (27) | View species results |
| Steroid pathway | 37 | 13 | CAS (8) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 693 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 127 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cacipscaffold_3770165500 | Alkaloid | STR | low | borderline |
| Cacipscaffold_3770165520 | Alkaloid | STR | low | borderline |
| Cacipscaffold_3770166600 | Alkaloid | STR | low | borderline |
| Cacipscaffold_3830171070 | Alkaloid | STR | low | borderline |
| Cacipscaffold_400179620 | Alkaloid | STR | medium | pass |
| Cacipscaffold_400180400 | Alkaloid | STR | medium | pass |
| Cacipscaffold_400180420 | Alkaloid | STR | medium | pass |
| Cacipscaffold_4030182650 | Alkaloid | STR | low | borderline |
| Cacipscaffold_4040183950 | Alkaloid | STR | low | borderline |
| Cacipscaffold_4550206700 | Alkaloid | STR | low | borderline |
| Cacipscaffold_4550206720 | Alkaloid | STR | low | borderline |
| Cacipscaffold_4620211930 | Alkaloid | STR | low | borderline |
| Cacipscaffold_490232760 | Alkaloid | STR | low | borderline |
| Cacipscaffold_5020238300 | Alkaloid | STR | low | borderline |
| Cacipscaffold_5020238350 | Alkaloid | STR | low | borderline |
| Cacipscaffold_5050241210 | Alkaloid | STR | low | borderline |
| Cacipscaffold_5160252410 | Alkaloid | STR | low | borderline |
| Cacipscaffold_5960301300 | Alkaloid | STR | medium | pass |
| Cacipscaffold_600305110 | Alkaloid | STR | medium | pass |
| Cacipscaffold_6060312740 | Alkaloid | STR | low | borderline |
| Cacipscaffold_6280325540 | Alkaloid | STR | low | borderline |
| Cacipscaffold_6340328310 | Alkaloid | STR | low | borderline |
| Cacipscaffold_6350328860 | Alkaloid | STR | low | borderline |
| Cacipscaffold_6560339730 | Alkaloid | STR | low | borderline |
| Cacipscaffold_6580340840 | Alkaloid | STR | low | borderline |
| Cacipscaffold_710350090 | Alkaloid | STR | medium | pass |
| Cacipscaffold_790353360 | Alkaloid | STR | low | borderline |
| Cacipscaffold_810354220 | Alkaloid | STR | low | borderline |
| Cacipscaffold_880359730 | Alkaloid | STR | low | borderline |
| Cacipscaffold_880359760 | Alkaloid | STR | low | borderline |
| Cacipscaffold_970365970 | Alkaloid | STR | medium | pass |
| Cacipscaffold_10000030 | Alkaloid | T16H | medium | borderline |
| Cacipscaffold_1460025840 | Alkaloid | T16H | low | borderline |
| Cacipscaffold_160035820 | Alkaloid | T16H | medium | borderline |
| Cacipscaffold_2810109290 | Alkaloid | T16H | medium | borderline |
| Cacipscaffold_3610157740 | Alkaloid | T16H | medium | borderline |
| Cacipscaffold_3850171600 | Alkaloid | T16H | medium | borderline |
| Cacipscaffold_4520205270 | Alkaloid | T16H | medium | borderline |
| Cacipscaffold_490231890 | Alkaloid | T16H | medium | borderline |
| Cacipscaffold_5090245190 | Alkaloid | T16H | medium | borderline |
| Cacipscaffold_5940300190 | Alkaloid | T16H | medium | borderline |
| Cacipscaffold_6410334030 | Alkaloid | T16H | medium | borderline |
| Cacipscaffold_680346280 | Alkaloid | T16H | medium | borderline |
| Cacipscaffold_1440025620 | Alkaloid | T3O | medium | pass |
| Cacipscaffold_1460025850 | Alkaloid | T3O | medium | pass |
| Cacipscaffold_2010063730 | Alkaloid | T3O | medium | borderline |
| Cacipscaffold_2010063800 | Alkaloid | T3O | medium | borderline |
| Cacipscaffold_2010063810 | Alkaloid | T3O | medium | borderline |
| Cacipscaffold_2480087050 | Alkaloid | T3O | low | borderline |
| Cacipscaffold_2600093660 | Alkaloid | T3O | medium | borderline |