Chromochloris zofingiensis (chromochloris_zofingiensis)
Imported from atlas release summary for Chromochloris zofingiensis.
177
Candidate Genes
97
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
177
Candidate Genes
C4H
5.74%
NMT
5.61%
4CL
5.61%
C3'H/CYP98A
5.21%
BAHD
4.67%
POD
3.6%
TRI/TRII
3.47%
STR
3.34%
Other Families
62.75%
More Families (89)
PYKS
23
3.07%
DWF4/CYP90B1
23
3.07%
IFR
22
2.94%
CAD
21
2.8%
CYP76
20
2.67%
GS
19
2.54%
CNMT
17
2.27%
T3O
16
2.14%
IFS
16
2.14%
FNS
14
1.87%
CYP71
14
1.87%
CSE
13
1.74%
SLS
12
1.6%
SGD
12
1.6%
SMT1/SMT2/SMT3
11
1.47%
F3'H/CYP75B
10
1.34%
BR6OX2/CYP85A2
10
1.34%
DFR
9
1.2%
ANR
8
1.07%
CPR
8
1.07%
CAS
8
1.07%
CCR
7
0.93%
MPO
6
0.8%
CYP719
6
0.8%
COMT
6
0.8%
COR
5
0.67%
F3'5'H/CYP75A
5
0.67%
AACT
5
0.67%
8HGO
4
0.53%
ODC
4
0.53%
IO
4
0.53%
UFGT
4
0.53%
SMO1/SMO2
4
0.53%
CPD/CYP90A1
4
0.53%
BR6OX1/CYP85A1
4
0.53%
UGT
4
0.53%
H6H
3
0.4%
CYP80F1
3
0.4%
PMT
3
0.4%
7DLGT
3
0.4%
PAL
3
0.4%
LAC
3
0.4%
SQS/FDFT1
3
0.4%
DET2
3
0.4%
FPPS
3
0.4%
MDS/IspF
3
0.4%
GGPPS
3
0.4%
MCT/IspD
3
0.4%
6OMT_4OMT_SOMT
2
0.27%
7DLH
2
0.27%
G8O/G8H
2
0.27%
ISY
2
0.27%
TDC
2
0.27%
CYP80B1
2
0.27%
F3H
2
0.27%
CCoAOMT
2
0.27%
TAT
2
0.27%
HPPR
2
0.27%
SQE
2
0.27%
CYP51G1
2
0.27%
ROT3/CYP90C1
2
0.27%
PMK
2
0.27%
MVK
2
0.27%
GES
1
0.13%
TYDC_DDC
1
0.13%
XMT_MXMT_DXMT
1
0.13%
ADC
1
0.13%
NCS
1
0.13%
T16H
1
0.13%
LAMT
1
0.13%
CODM/T6ODM
1
0.13%
16OMT
1
0.13%
CHI
1
0.13%
ANS/LDOX
1
0.13%
CPI1
1
0.13%
DWF7
1
0.13%
CYP90D1
1
0.13%
HYD1
1
0.13%
DWF1
1
0.13%
DWF5
1
0.13%
FK
1
0.13%
DXS
1
0.13%
IDI
1
0.13%
HDR/IspH
1
0.13%
DXR
1
0.13%
MVD
1
0.13%
CMK/IspE
1
0.13%
HDS/IspG
1
0.13%
HMGS
1
0.13%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Alkaloid pathway | 66 | 12 | TRI/TRII (15) | View species results |
| Terpenoid pathway | 45 | 14 | BAHD (22) | View species results |
| Phenylpropanoid pathway | 29 | 6 | POD (17) | View species results |
| Steroid pathway | 21 | 9 | CAS (7) | View species results |
| Flavonoid pathway | 8 | 5 | 4CL (2) | View species results |
| Rosmarinic acid pathway | 8 | 5 | CPR (3) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 241 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 1 | 35 | BAHD |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Czof01G0002100.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Czof01G0010040.1 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Czof02G0005940.1 | Flavonoid | 4CL | low | borderline | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| Czof05G0007980.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Czof06G0006430.1 | Flavonoid | 4CL | low | borderline | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Czof07G0003530.1 | Flavonoid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Czof07G0005910.1 | Flavonoid | 4CL | low | borderline | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| Czof08G0002240.1 | Flavonoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| Czof09G0004000.1 | Flavonoid | 4CL | low | borderline | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| Czof11G0005140.1 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Czof12G0002440.1 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Czof12G0003780.1 | Flavonoid | 4CL | low | borderline | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Czof12G0003790.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| CzofchrUn117710003650.1 | Flavonoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| Czof01G0002100.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Czof01G0010040.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Czof02G0005940.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| Czof05G0007980.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Czof06G0006430.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Czof07G0003530.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Czof07G0005910.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| Czof08G0002240.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| Czof09G0004000.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| Czof11G0005140.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Czof12G0002440.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Czof12G0003780.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Czof12G0003790.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| CzofchrUn117710003650.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| Czof01G0002100.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Czof01G0010040.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Czof02G0005940.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| Czof05G0007980.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Czof06G0006430.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Czof07G0003530.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Czof07G0005910.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| Czof08G0002240.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| Czof09G0004000.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| Czof11G0005140.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Czof12G0002440.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Czof12G0003780.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Czof12G0003790.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| CzofchrUn117710003650.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |