PlantSME Plant secondary metabolism enzyme database

Chromochloris zofingiensis (chromochloris_zofingiensis)

Imported from atlas release summary for Chromochloris zofingiensis.

177
Candidate Genes
97
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Alkaloid pathway 37.29% Terpenoid pathway 25.42% Phenylpropanoid pathway 16.38% Steroid pathway 11.86% Flavonoid pathway 4.52% Rosmarinic acid pathway 4.52%
Family Distribution
C4H 5.74% NMT 5.61% 4CL 5.61% C3'H/CYP98A 5.21% BAHD 4.67% POD 3.6% TRI/TRII 3.47% STR 3.34%
Other Families 62.75%
More Families (89)
PYKS 23 3.07% DWF4/CYP90B1 23 3.07% IFR 22 2.94% CAD 21 2.8% CYP76 20 2.67% GS 19 2.54% CNMT 17 2.27% T3O 16 2.14% IFS 16 2.14% FNS 14 1.87% CYP71 14 1.87% CSE 13 1.74% SLS 12 1.6% SGD 12 1.6% SMT1/SMT2/SMT3 11 1.47% F3'H/CYP75B 10 1.34% BR6OX2/CYP85A2 10 1.34% DFR 9 1.2% ANR 8 1.07% CPR 8 1.07% CAS 8 1.07% CCR 7 0.93% MPO 6 0.8% CYP719 6 0.8% COMT 6 0.8% COR 5 0.67% F3'5'H/CYP75A 5 0.67% AACT 5 0.67% 8HGO 4 0.53% ODC 4 0.53% IO 4 0.53% UFGT 4 0.53% SMO1/SMO2 4 0.53% CPD/CYP90A1 4 0.53% BR6OX1/CYP85A1 4 0.53% UGT 4 0.53% H6H 3 0.4% CYP80F1 3 0.4% PMT 3 0.4% 7DLGT 3 0.4% PAL 3 0.4% LAC 3 0.4% SQS/FDFT1 3 0.4% DET2 3 0.4% FPPS 3 0.4% MDS/IspF 3 0.4% GGPPS 3 0.4% MCT/IspD 3 0.4% 6OMT_4OMT_SOMT 2 0.27% 7DLH 2 0.27% G8O/G8H 2 0.27% ISY 2 0.27% TDC 2 0.27% CYP80B1 2 0.27% F3H 2 0.27% CCoAOMT 2 0.27% TAT 2 0.27% HPPR 2 0.27% SQE 2 0.27% CYP51G1 2 0.27% ROT3/CYP90C1 2 0.27% PMK 2 0.27% MVK 2 0.27% GES 1 0.13% TYDC_DDC 1 0.13% XMT_MXMT_DXMT 1 0.13% ADC 1 0.13% NCS 1 0.13% T16H 1 0.13% LAMT 1 0.13% CODM/T6ODM 1 0.13% 16OMT 1 0.13% CHI 1 0.13% ANS/LDOX 1 0.13% CPI1 1 0.13% DWF7 1 0.13% CYP90D1 1 0.13% HYD1 1 0.13% DWF1 1 0.13% DWF5 1 0.13% FK 1 0.13% DXS 1 0.13% IDI 1 0.13% HDR/IspH 1 0.13% DXR 1 0.13% MVD 1 0.13% CMK/IspE 1 0.13% HDS/IspG 1 0.13% HMGS 1 0.13%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Alkaloid pathway 66 12 TRI/TRII (15) View species results
Terpenoid pathway 45 14 BAHD (22) View species results
Phenylpropanoid pathway 29 6 POD (17) View species results
Steroid pathway 21 9 CAS (7) View species results
Flavonoid pathway 8 5 4CL (2) View species results
Rosmarinic acid pathway 8 5 CPR (3) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 241 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 1 35 BAHD
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
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Gene Pathway Family Confidence Status
Czof01G0005640.1 Alkaloid SGD low borderline
Czof03G0009420.1 Alkaloid SGD low borderline
Czof08G0003190.1 Alkaloid SGD medium pass
Czof09G0001880.1 Alkaloid SGD medium pass
Czof10G0000490.1 Alkaloid SGD medium pass
Czof12G0006070.1 Alkaloid SGD low borderline
Czof12G0007090.1 Alkaloid SGD low borderline
Czof14G0001270.1 Alkaloid SGD medium pass
Czof14G0001280.1 Alkaloid SGD medium pass
Czof15G0000840.1 Alkaloid SGD medium pass
Czof16G0000470.1 Alkaloid SGD medium pass
Czof16G0001400.1 Alkaloid SGD medium pass