PlantSME Plant secondary metabolism enzyme database

Chrysanthemum seticuspe (chrysanthemum_seticuspe)

Imported from atlas release summary for Chrysanthemum seticuspe.

3449
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 33.6% Alkaloid pathway 20.59% Phenylpropanoid pathway 18.15% Flavonoid pathway 12.64% Rosmarinic acid pathway 8.93% Steroid pathway 6.09%
Family Distribution
C4H 7.42% C3'H/CYP98A 6.47% BAHD 5.31% CYP76 4.93% UGT 4.56% 7DLGT 3.98% IFS 3.75% UFGT 3.74%
Other Families 59.84%
More Families (97)
T3O 304 3.33% POD 275 3.01% 4CL 228 2.49% F3'H/CYP75B 225 2.46% BR6OX2/CYP85A2 212 2.32% TPS 208 2.28% GES 187 2.05% DWF4/CYP90B1 179 1.96% CAS 175 1.91% NMT 163 1.78% F3H 162 1.77% CAD 126 1.38% STR 125 1.37% CODM/T6ODM 113 1.24% LAC 107 1.17% CYP71 102 1.12% HCT 101 1.11% CYP90D1 98 1.07% SMT1/SMT2/SMT3 96 1.05% T16H 95 1.04% G8O/G8H 94 1.03% H6H 91 1.0% TAT 89 0.97% IO 86 0.94% TRI/TRII 84 0.92% F3'5'H/CYP75A 79 0.86% CSE 77 0.84% BBE 75 0.82% COMT 70 0.77% F5H/CYP84A 66 0.72% RAS 65 0.71% PYKS 57 0.62% GS 56 0.61% 16OMT 55 0.6% FNS 54 0.59% IFR 51 0.56% 7DLH 50 0.55% PMT 48 0.53% SLS 46 0.5% CPD/CYP90A1 45 0.49% CYP51G1 45 0.49% CYP80B1 39 0.43% NCS 36 0.39% BR6OX1/CYP85A1 36 0.39% 8HGO 34 0.37% SGD 33 0.36% ANS/LDOX 33 0.36% CPR 32 0.35% LAMT 28 0.31% ANR 28 0.31% DFR 28 0.31% CCR 26 0.28% CCoAOMT 25 0.27% FPPS 25 0.27% SQE 24 0.26% PAL 21 0.23% HMGR 20 0.22% CYP80F1 19 0.21% HPPR 18 0.2% ROT3/CYP90C1 18 0.2% AACT 18 0.2% CHS 17 0.19% COR 16 0.18% CYP719 15 0.16% MPO 14 0.15% TYDC_DDC 14 0.15% ISY 13 0.14% SQS/FDFT1 13 0.14% DXS 12 0.13% CHI 11 0.12% XMT_MXMT_DXMT 10 0.11% CNMT 9 0.1% GGPPS 9 0.1% TDC 8 0.09% DET2 8 0.09% MVK 8 0.09% IDI 8 0.09% ADC 7 0.08% SMO1/SMO2 7 0.08% HDR/IspH 7 0.08% PMK 7 0.08% MVD 6 0.07% HDS/IspG 6 0.07% DWF1 5 0.05% DXR 5 0.05% GPPS 5 0.05% HMGS 4 0.04% CPI1 3 0.03% MCT/IspD 3 0.03% MDS/IspF 3 0.03% FLS 2 0.02% HYD1 2 0.02% DWF7 2 0.02% CMK/IspE 2 0.02% ODC 1 0.01% DWF5 1 0.01% FK 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1159 19 UGT (366) View species results
Alkaloid pathway 710 26 7DLGT (174) View species results
Phenylpropanoid pathway 626 12 POD (221) View species results
Flavonoid pathway 436 15 UFGT (309) View species results
Rosmarinic acid pathway 308 7 C4H (144) View species results
Steroid pathway 210 12 CAS (119) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3916 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 651 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
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Gene Pathway Family Confidence Status
CsetCse_sc002873.10234640 Flavonoid CHS medium pass
CsetCse_sc005052.10354350 Flavonoid CHS medium pass
CsetCse_sc006356.10417040 Flavonoid CHS medium pass
CsetCse_sc007793.10481510 Flavonoid CHS medium pass
CsetCse_sc008321.10503530 Flavonoid CHS medium pass
CsetCse_sc009435.10548760 Flavonoid CHS medium pass
CsetCse_sc009447.10549180 Flavonoid CHS medium pass
CsetCse_sc010629.10593780 Flavonoid CHS medium pass
CsetCse_sc011905.10637750 Flavonoid CHS medium pass
CsetCse_sc012162.10646450 Flavonoid CHS medium pass
CsetCse_sc012348.10652590 Flavonoid CHS medium pass
CsetCse_sc013962.10704960 Flavonoid CHS medium pass
CsetCse_sc015325.10745670 Flavonoid CHS medium pass
CsetCse_sc019697.10863970 Flavonoid CHS medium pass
CsetCse_sc021935.10916420 Flavonoid CHS low borderline
CsetCse_sc022727.10934050 Flavonoid CHS low borderline
CsetCse_sc035904.11164110 Flavonoid CHS medium pass