PlantSME Plant secondary metabolism enzyme database

Citrullus lanatus (citrullus_lanatus)

Imported from atlas release summary for Citrullus lanatus.

1324
Candidate Protein Records
1156
Pathway-Level Records
2855
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 28.72% Alkaloid pathway 21.37% Phenylpropanoid pathway 19.55% Flavonoid pathway 14.71% Rosmarinic acid pathway 10.38% Steroid pathway 5.28%
Family Distribution
C4H 7.11% C3'H/CYP98A 6.37% BAHD 5.01% CYP76 4.55% IFS 4.45% UGT 4.38% UFGT 4.1% 7DLGT 3.99%
Other Families 60.04%
More Families (96)
4CL 108 3.78% POD 107 3.75% T3O 106 3.71% DWF4/CYP90B1 70 2.45% F3H 64 2.24% NMT 56 1.96% BR6OX2/CYP85A2 49 1.72% STR 48 1.68% F3'H/CYP75B 45 1.58% SMT1/SMT2/SMT3 39 1.37% PAL 36 1.26% CAD 36 1.26% CODM/T6ODM 35 1.23% H6H 34 1.19% TRI/TRII 32 1.12% IFR 32 1.12% LAC 32 1.12% CAS 32 1.12% SGD 29 1.02% IO 26 0.91% G8O/G8H 26 0.91% HCT 26 0.91% CYP71 25 0.88% GES 24 0.84% CYP90D1 24 0.84% BBE 23 0.81% TPS 23 0.81% GS 21 0.74% F3'5'H/CYP75A 21 0.74% CSE 20 0.7% TAT 20 0.7% RAS 19 0.67% PYKS 18 0.63% COMT 18 0.63% PMT 17 0.6% SLS 17 0.6% T16H 16 0.56% ANR 16 0.56% CCR 16 0.56% BR6OX1/CYP85A1 16 0.56% CYP51G1 16 0.56% 16OMT 14 0.49% FNS 14 0.49% F5H/CYP84A 14 0.49% NCS 13 0.46% COR 12 0.42% ROT3/CYP90C1 12 0.42% 7DLH 11 0.39% CPD/CYP90A1 10 0.35% 8HGO 9 0.32% LAMT 9 0.32% CYP719 8 0.28% ANS/LDOX 8 0.28% DFR 8 0.28% HPPR 8 0.28% CNMT 7 0.25% AACT 7 0.25% MPO 6 0.21% CYP80B1 6 0.21% CCoAOMT 6 0.21% DET2 6 0.21% CPR 5 0.18% SQS/FDFT1 5 0.18% SQE 5 0.18% FPPS 5 0.18% GGPPS 5 0.18% DXS 5 0.18% CHS 4 0.14% CHI 4 0.14% HMGR 4 0.14% MVK 4 0.14% ISY 3 0.11% TYDC_DDC 3 0.11% IDI 3 0.11% MVD 3 0.11% PMK 3 0.11% 6OMT_4OMT_SOMT 2 0.07% CYP80F1 2 0.07% ODC 2 0.07% SMO1/SMO2 2 0.07% DWF1 2 0.07% MCT/IspD 2 0.07% HDR/IspH 2 0.07% TDC 1 0.04% ADC 1 0.04% FLS 1 0.04% CPI1 1 0.04% HYD1 1 0.04% DWF7 1 0.04% DWF5 1 0.04% FK 1 0.04% HDS/IspG 1 0.04% CMK/IspE 1 0.04% DXR 1 0.04% MDS/IspF 1 0.04% HMGS 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 332 19 UGT (114) View species results
Alkaloid pathway 247 21 7DLGT (54) View species results
Phenylpropanoid pathway 226 11 POD (101) View species results
Flavonoid pathway 170 9 UFGT (107) View species results
Rosmarinic acid pathway 120 7 C4H (51) View species results
Steroid pathway 61 11 CAS (26) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1162 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 188 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Protein/Isoform Record Pathway Family Confidence Status Best Target
citrullus_lanatus_ClG42_10g0062400.10 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
citrullus_lanatus_ClG42_10g0115800.10 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
citrullus_lanatus_ClG42_10g0127400.10 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
citrullus_lanatus_ClG42_10g0198200.10 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
citrullus_lanatus_ClG42_11g0144700.10 Rosmarinic Acid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
citrullus_lanatus_ClG42_11g0154700.10 Rosmarinic Acid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
citrullus_lanatus_ClG42_11g0175600.10 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
citrullus_lanatus_ClG42_11g0204800.10 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY