Citrullus lanatus (citrullus_lanatus)
Imported from atlas release summary for Citrullus lanatus.
1156
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1156
Candidate Genes
C4H
7.11%
C3'H/CYP98A
6.37%
BAHD
5.01%
CYP76
4.55%
IFS
4.45%
UGT
4.38%
UFGT
4.1%
7DLGT
3.99%
Other Families
60.04%
More Families (96)
4CL
108
3.78%
POD
107
3.75%
T3O
106
3.71%
DWF4/CYP90B1
70
2.45%
F3H
64
2.24%
NMT
56
1.96%
BR6OX2/CYP85A2
49
1.72%
STR
48
1.68%
F3'H/CYP75B
45
1.58%
SMT1/SMT2/SMT3
39
1.37%
PAL
36
1.26%
CAD
36
1.26%
CODM/T6ODM
35
1.23%
H6H
34
1.19%
TRI/TRII
32
1.12%
IFR
32
1.12%
LAC
32
1.12%
CAS
32
1.12%
SGD
29
1.02%
IO
26
0.91%
G8O/G8H
26
0.91%
HCT
26
0.91%
CYP71
25
0.88%
GES
24
0.84%
CYP90D1
24
0.84%
BBE
23
0.81%
TPS
23
0.81%
GS
21
0.74%
F3'5'H/CYP75A
21
0.74%
CSE
20
0.7%
TAT
20
0.7%
RAS
19
0.67%
PYKS
18
0.63%
COMT
18
0.63%
PMT
17
0.6%
SLS
17
0.6%
T16H
16
0.56%
ANR
16
0.56%
CCR
16
0.56%
BR6OX1/CYP85A1
16
0.56%
CYP51G1
16
0.56%
16OMT
14
0.49%
FNS
14
0.49%
F5H/CYP84A
14
0.49%
NCS
13
0.46%
COR
12
0.42%
ROT3/CYP90C1
12
0.42%
7DLH
11
0.39%
CPD/CYP90A1
10
0.35%
8HGO
9
0.32%
LAMT
9
0.32%
CYP719
8
0.28%
ANS/LDOX
8
0.28%
DFR
8
0.28%
HPPR
8
0.28%
CNMT
7
0.25%
AACT
7
0.25%
MPO
6
0.21%
CYP80B1
6
0.21%
CCoAOMT
6
0.21%
DET2
6
0.21%
CPR
5
0.18%
SQS/FDFT1
5
0.18%
SQE
5
0.18%
FPPS
5
0.18%
GGPPS
5
0.18%
DXS
5
0.18%
CHS
4
0.14%
CHI
4
0.14%
HMGR
4
0.14%
MVK
4
0.14%
ISY
3
0.11%
TYDC_DDC
3
0.11%
IDI
3
0.11%
MVD
3
0.11%
PMK
3
0.11%
6OMT_4OMT_SOMT
2
0.07%
CYP80F1
2
0.07%
ODC
2
0.07%
SMO1/SMO2
2
0.07%
DWF1
2
0.07%
MCT/IspD
2
0.07%
HDR/IspH
2
0.07%
TDC
1
0.04%
ADC
1
0.04%
FLS
1
0.04%
CPI1
1
0.04%
HYD1
1
0.04%
DWF7
1
0.04%
DWF5
1
0.04%
FK
1
0.04%
HDS/IspG
1
0.04%
CMK/IspE
1
0.04%
DXR
1
0.04%
MDS/IspF
1
0.04%
HMGS
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 332 | 19 | UGT (114) | View species results |
| Alkaloid pathway | 247 | 21 | 7DLGT (54) | View species results |
| Phenylpropanoid pathway | 226 | 11 | POD (101) | View species results |
| Flavonoid pathway | 170 | 9 | UFGT (107) | View species results |
| Rosmarinic acid pathway | 120 | 7 | C4H (51) | View species results |
| Steroid pathway | 61 | 11 | CAS (26) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1162 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 188 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| citrullus_lanatus_ClG42_01g0007400.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_02g0058300.10 | Alkaloid | IO | low | borderline |
| citrullus_lanatus_ClG42_02g0058400.10 | Alkaloid | IO | low | borderline |
| citrullus_lanatus_ClG42_03g0131700.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_03g0131800.10 | Alkaloid | IO | medium | pass |
| citrullus_lanatus_ClG42_05g0195700.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_05g0211200.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_05g0211500.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_05g0211700.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_05g0211800.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_05g0211900.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_05g0212300.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_05g0213100.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_05g0235200.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_05g0279500.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_06g0015400.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_06g0027800.10 | Alkaloid | IO | medium | pass |
| citrullus_lanatus_ClG42_06g0039600.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_08g0096200.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_08g0170400.10 | Alkaloid | IO | low | borderline |
| citrullus_lanatus_ClG42_09g0043400.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_09g0174000.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_10g0124900.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_10g0192400.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_11g0133200.10 | Alkaloid | IO | medium | borderline |
| citrullus_lanatus_ClG42_11g0155600.10 | Alkaloid | IO | medium | borderline |