Cladopus chinensis (cladopus_chinensis)
Imported from atlas release summary for Cladopus chinensis.
1280
Candidate Protein Records
930
Pathway-Level Records
2256
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2256
Family-Level Calls
POD
6.52%
4CL
5.85%
C3'H/CYP98A
5.63%
BAHD
5.63%
C4H
5.1%
T3O
3.59%
NMT
3.15%
IFS
2.88%
Other Families
61.66%
More Families (94)
7DLGT
62
2.75%
CYP76
60
2.66%
UGT
60
2.66%
UFGT
59
2.62%
CYP71
58
2.57%
IFR
57
2.53%
F3H
51
2.26%
F3'H/CYP75B
47
2.08%
STR
43
1.91%
BR6OX2/CYP85A2
39
1.73%
DWF4/CYP90B1
35
1.55%
GS
33
1.46%
LAC
33
1.46%
CODM/T6ODM
32
1.42%
PYKS
32
1.42%
CSE
30
1.33%
TRI/TRII
29
1.29%
CAS
27
1.2%
H6H
23
1.02%
SMT1/SMT2/SMT3
23
1.02%
CAD
22
0.98%
CYP90D1
22
0.98%
CPD/CYP90A1
20
0.89%
SGD
18
0.8%
PAL
18
0.8%
BBE
17
0.75%
CHS
16
0.71%
SLS
15
0.66%
COMT
15
0.66%
CNMT
14
0.62%
FPPS
14
0.62%
G8O/G8H
13
0.58%
FNS
13
0.58%
ANR
13
0.58%
AACT
13
0.58%
GGPPS
13
0.58%
T16H
11
0.49%
CCR
11
0.49%
MCT/IspD
11
0.49%
8HGO
10
0.44%
DFR
10
0.44%
CPR
10
0.44%
RAS
10
0.44%
CYP51G1
10
0.44%
ADC
9
0.4%
NCS
9
0.4%
7DLH
8
0.35%
F3'5'H/CYP75A
8
0.35%
HCT
8
0.35%
TAT
8
0.35%
SQS/FDFT1
8
0.35%
DET2
8
0.35%
PMT
7
0.31%
MPO
7
0.31%
DXS
7
0.31%
IO
6
0.27%
GES
6
0.27%
F5H/CYP84A
6
0.27%
BR6OX1/CYP85A1
6
0.27%
CMK/IspE
6
0.27%
HDR/IspH
6
0.27%
16OMT
5
0.22%
TYDC_DDC
5
0.22%
ROT3/CYP90C1
5
0.22%
TPS
5
0.22%
DXR
5
0.22%
COR
4
0.18%
CYP719
4
0.18%
CCoAOMT
4
0.18%
MDS/IspF
4
0.18%
HDS/IspG
4
0.18%
IDI
4
0.18%
CYP80B1
3
0.13%
TDC
3
0.13%
ISY
3
0.13%
CHI
3
0.13%
ANS/LDOX
3
0.13%
SQE
3
0.13%
PMK
3
0.13%
LAMT
2
0.09%
FLS
2
0.09%
HPPR
2
0.09%
FK
2
0.09%
SMO1/SMO2
2
0.09%
CPI1
2
0.09%
DWF7
2
0.09%
DWF1
2
0.09%
MVK
2
0.09%
HMGR
2
0.09%
MVD
2
0.09%
ODC
1
0.04%
XMT_MXMT_DXMT
1
0.04%
HYD1
1
0.04%
GPPS
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 253 | 19 | BAHD (100) | View species results |
| Phenylpropanoid pathway | 250 | 11 | POD (132) | View species results |
| Alkaloid pathway | 186 | 16 | NMT (38) | View species results |
| Flavonoid pathway | 120 | 9 | UFGT (54) | View species results |
| Rosmarinic acid pathway | 69 | 7 | 4CL (22) | View species results |
| Steroid pathway | 52 | 11 | CAS (23) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 764 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 145 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| CLchi08G0011140.1 | Alkaloid | TDC | low | borderline |
| CLchi12G0002210.1 | Alkaloid | TDC | low | borderline |
| CLchi01G0006640.1 | Alkaloid | TRI/TRII | low | borderline |
| CLchi03G0001390.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi04G0013290.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi05G0000520.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi05G0001330.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi05G0007320.1 | Alkaloid | TRI/TRII | low | borderline |
| CLchi06G0000980.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi10G0012550.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi10G0013130.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi11G0004880.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi11G0004950.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi20G0003020.1 | Alkaloid | TRI/TRII | low | borderline |
| CLchi20G0003650.1 | Alkaloid | TRI/TRII | low | borderline |
| CLchi21G0002510.1 | Alkaloid | TRI/TRII | low | borderline |
| CLchi21G0003510.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi24G0007600.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi24G0008720.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi24G0009180.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi25G0005510.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi25G0008380.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi27G0001270.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi27G0002750.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi27G0005770.1 | Alkaloid | TRI/TRII | low | borderline |
| CLchiGWHACFD000000770001040.1 | Alkaloid | TRI/TRII | low | borderline |
| CLchiGWHACFD000000770001210.1 | Alkaloid | TRI/TRII | low | borderline |
| CLchiGWHACFD000002440011470.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchiGWHACFD000003560019740.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchiGWHACFD000004190023170.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchiGWHACFD000004600026810.1 | Alkaloid | TRI/TRII | medium | pass |
| CLchi11G0004900.1 | Alkaloid | TYDC_DDC | medium | borderline |
| CLchi12G0002160.1 | Alkaloid | TYDC_DDC | medium | borderline |
| CLchi13G0003800.1 | Alkaloid | TYDC_DDC | low | borderline |
| CLchi23G0003160.1 | Alkaloid | TYDC_DDC | medium | borderline |
| CLchiGWHACFD000004010021870.1 | Alkaloid | TYDC_DDC | low | borderline |
| CLchi15G0000620.1 | Alkaloid | XMT_MXMT_DXMT | low | borderline |
| CLchi03G0003740.1 | Flavonoid | 4CL | medium | pass |
| CLchi03G0003750.1 | Flavonoid | 4CL | medium | pass |
| CLchi04G0005750.1 | Flavonoid | 4CL | medium | pass |
| CLchi04G0009800.1 | Flavonoid | 4CL | medium | pass |
| CLchi04G0011250.1 | Flavonoid | 4CL | low | borderline |
| CLchi06G0003350.1 | Flavonoid | 4CL | low | borderline |
| CLchi06G0008270.1 | Flavonoid | 4CL | medium | pass |
| CLchi08G0003830.1 | Flavonoid | 4CL | medium | pass |
| CLchi09G0001040.1 | Flavonoid | 4CL | medium | pass |
| CLchi09G0004410.1 | Flavonoid | 4CL | low | borderline |
| CLchi11G0008190.1 | Flavonoid | 4CL | low | borderline |
| CLchi12G0000400.1 | Flavonoid | 4CL | low | borderline |
| CLchi12G0002250.1 | Flavonoid | 4CL | medium | pass |